Literature DB >> 14611205

Efficient and sequence-specific DNA-templated polymerization of peptide nucleic acid aldehydes.

Daniel M Rosenbaum1, David R Liu.   

Abstract

On the basis of the distance-dependence of DNA-templated reductive amination reactions and of recent findings of D. Lynn and co-workers, we developed DNA-templated polymerizations of synthetic peptide nucleic acid (PNA) aldehydes. The coupling reactions proceed in a highly efficient and sequence-specific manner, even in the presence of mixtures of PNA aldehydes of different sequence. Synthetic peptide nucleic acid polymers containing as many as 40 PNA units (representing 10 consecutive coupling reactions) were formed efficiently. The ease of preparing PNAs containing tailor-made functional groups together with these findings raises the possibility of evolving synthetic sequence-defined polymers by iterated cycles of translation, selection, PCR amplification, and diversification previously available only to biological macromolecules.

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Year:  2003        PMID: 14611205     DOI: 10.1021/ja038058b

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  31 in total

1.  Reaction discovery enabled by DNA-templated synthesis and in vitro selection.

Authors:  Matthew W Kanan; Mary M Rozenman; Kaori Sakurai; Thomas M Snyder; David R Liu
Journal:  Nature       Date:  2004-09-30       Impact factor: 49.962

2.  Darwinian evolution of an alternative genetic system provides support for TNA as an RNA progenitor.

Authors:  Hanyang Yu; Su Zhang; John C Chaput
Journal:  Nat Chem       Date:  2012-01-10       Impact factor: 24.427

3.  beta-Peptides as inhibitors of protein-protein interactions.

Authors:  Joshua A Kritzer; Olen M Stephens; Danielle A Guarracino; Samuel K Reznik; Alanna Schepartz
Journal:  Bioorg Med Chem       Date:  2005-01-03       Impact factor: 3.641

4.  DNA-templated polymerization of side-chain-functionalized peptide nucleic acid aldehydes.

Authors:  Ralph E Kleiner; Yevgeny Brudno; Michael E Birnbaum; David R Liu
Journal:  J Am Chem Soc       Date:  2008-03-15       Impact factor: 15.419

Review 5.  Non-natural nucleic acids for synthetic biology.

Authors:  Daniel H Appella
Journal:  Curr Opin Chem Biol       Date:  2009-10-29       Impact factor: 8.822

6.  Evolution of synthetic polymers.

Authors:  Alexander Roloff; Oliver Seitz
Journal:  Artif DNA PNA XNA       Date:  2010-10

7.  Translation of DNA into a library of 13,000 synthetic small-molecule macrocycles suitable for in vitro selection.

Authors:  Brian N Tse; Thomas M Snyder; Yinghua Shen; David R Liu
Journal:  J Am Chem Soc       Date:  2008-10-29       Impact factor: 15.419

8.  In vitro selection of a DNA-templated small-molecule library reveals a class of macrocyclic kinase inhibitors.

Authors:  Ralph E Kleiner; Christoph E Dumelin; Gerald C Tiu; Kaori Sakurai; David R Liu
Journal:  J Am Chem Soc       Date:  2010-08-25       Impact factor: 15.419

9.  Templated synthesis of peptide nucleic acids via sequence-selective base-filling reactions.

Authors:  Jennifer M Heemstra; David R Liu
Journal:  J Am Chem Soc       Date:  2009-08-19       Impact factor: 15.419

10.  An in vitro translation, selection and amplification system for peptide nucleic acids.

Authors:  Yevgeny Brudno; Michael E Birnbaum; Ralph E Kleiner; David R Liu
Journal:  Nat Chem Biol       Date:  2009-12-27       Impact factor: 15.040

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