Literature DB >> 14601766

Bayesian deconvolution analysis of pulsatile hormone concentration profiles.

Timothy D Johnson1.   

Abstract

Many hormones are secreted into the circulatory system in a pulsatile manner and are cleared exponentially. The most common method of analyzing these systems is to deconvolve the hormone concentration into a secretion function and a clearance function. Accurate estimation of the model parameters depends on the number and location of the secretion pulses. To date, deconvolution analysis assumes the number and approximate location of these pulses are known a priori. In this article, we present a novel Bayesian approach to deconvolution that jointly models the number of pulses along with all other model parameters. Our method stochastically searches for the secretion pulses. This is accomplished by viewing the set of parameters that define the pulses as a point process. Pulses are determined by a birth-death process which is embedded in Markov chain Monte Carlo algorithm. This idea originated with Stephens (2000, Annals of Statistics 28, 40-74) in the context of finite mixture model density estimation, where the number of mixture components is unknown. There are several advantages that our model enjoys over the traditional frequentist approaches. These advantages are highlighted with four datasets consisting of serum concentration levels of luteinizing hormone obtained from ovariectomized ewes.

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Year:  2003        PMID: 14601766     DOI: 10.1111/1541-0420.00075

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  10 in total

1.  Using Cox cluster processes to model latent pulse location patterns in hormone concentration data.

Authors:  Nichole E Carlson; Gary K Grunwald; Timothy D Johnson
Journal:  Biostatistics       Date:  2015-11-09       Impact factor: 5.899

Review 2.  Motivations and methods for analyzing pulsatile hormone secretion.

Authors:  Johannes D Veldhuis; Daniel M Keenan; Steven M Pincus
Journal:  Endocr Rev       Date:  2008-10-21       Impact factor: 19.871

3.  Modeling associations between latent event processes governing time series of pulsing hormones.

Authors:  Huayu Liu; Nichole E Carlson; Gary K Grunwald; Alex J Polotsky
Journal:  Biometrics       Date:  2017-10-31       Impact factor: 2.571

4.  Quantifying Pituitary-Adrenal Dynamics and Deconvolution of Concurrent Cortisol and Adrenocorticotropic Hormone Data by Compressed Sensing.

Authors:  Rose T Faghih; Munther A Dahleh; Gail K Adler; Elizabeth B Klerman; Emery N Brown
Journal:  IEEE Trans Biomed Eng       Date:  2015-04-29       Impact factor: 4.538

5.  Bayesian analysis improves pulse secretion characterization in reproductive hormones.

Authors:  Huayu Liu; Alex J Polotsky; Gary K Grunwald; Nichole E Carlson
Journal:  Syst Biol Reprod Med       Date:  2017-12-29       Impact factor: 3.061

6.  A population-based approach to analyzing pulses in time series of hormone data.

Authors:  K W Horton; N E Carlson; G K Grunwald; M J Mulvahill; A J Polotsky
Journal:  Stat Med       Date:  2017-04-09       Impact factor: 2.373

7.  A Bayesian approach to modeling associations between pulsatile hormones.

Authors:  Nichole E Carlson; Timothy D Johnson; Morton B Brown
Journal:  Biometrics       Date:  2009-06       Impact factor: 2.571

8.  A comparison of methods for analyzing time series of pulsatile hormone data.

Authors:  N E Carlson; K W Horton; G K Grunwald
Journal:  Stat Med       Date:  2013-06-21       Impact factor: 2.373

9.  Reversible jump Markov chain Monte Carlo for deconvolution.

Authors:  Dongwoo Kang; Davide Verotta
Journal:  J Pharmacokinet Pharmacodyn       Date:  2007-01-13       Impact factor: 2.410

10.  Deconvolution of serum cortisol levels by using compressed sensing.

Authors:  Rose T Faghih; Munther A Dahleh; Gail K Adler; Elizabeth B Klerman; Emery N Brown
Journal:  PLoS One       Date:  2014-01-28       Impact factor: 3.240

  10 in total

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