Literature DB >> 26553914

Using Cox cluster processes to model latent pulse location patterns in hormone concentration data.

Nichole E Carlson1, Gary K Grunwald2, Timothy D Johnson3.   

Abstract

Many hormones, including stress hormones, are intermittently secreted as pulses. The pulsatile location process, describing times when pulses occur, is a regulator of the entire stress system. Characterizing the pulse location process is particularly difficult because the pulse locations are latent; only hormone concentration at sampled times is observed. In addition, for stress hormones the process may change both over the day and relative to common external stimuli. This potentially results in clustering in pulse locations across subjects. Current approaches to characterizing the pulse location process do not capture subject-to-subject clustering in locations. Here we show how a Bayesian Cox cluster process may be adapted as a model of the pulse location process. We show that this novel model of pulse locations is capable of detecting circadian rhythms in pulse locations, clustering of pulse locations between subjects, and identifying exogenous controllers of pulse events. We integrate our pulse location process into a model of hormone concentration, the observed data. A spatial birth-and-death Markov chain Monte Carlo algorithm is used for estimation. We exhibit the strengths of this model on simulated data and adrenocorticotropic and cortisol data collected to study the stress axis in depressed and non-depressed women.
© The Author 2015. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Bayesian analysis; Deconvolution; Mixture models; Point processes; Pulsatile hormones

Mesh:

Substances:

Year:  2015        PMID: 26553914      PMCID: PMC5006117          DOI: 10.1093/biostatistics/kxv046

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  21 in total

1.  Bayesian deconvolution analysis of pulsatile hormone concentration profiles.

Authors:  Timothy D Johnson
Journal:  Biometrics       Date:  2003-09       Impact factor: 2.571

Review 2.  The crucial role of pulsatile activity of the HPA axis for continuous dynamic equilibration.

Authors:  Stafford L Lightman; Becky L Conway-Campbell
Journal:  Nat Rev Neurosci       Date:  2010-09-15       Impact factor: 34.870

3.  Deconvolution analysis of hormone data.

Authors:  J D Veldhuis; M L Johnson
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

4.  Modeling of hormone secretion-generating mechanisms with splines: a pseudo-likelihood approach.

Authors:  Anna Liu; Yuedong Wang
Journal:  Biometrics       Date:  2007-03       Impact factor: 2.571

5.  Twenty-four-hour ACTH and cortisol pulsatility in depressed women.

Authors:  E A Young; N E Carlson; M B Brown
Journal:  Neuropsychopharmacology       Date:  2001-08       Impact factor: 7.853

6.  ACTH-dependent ultradian rhythm of corticosterone secretion.

Authors:  Francesca Spiga; Eleanor J Waite; Ying Liu; Yvonne M Kershaw; Greti Aguilera; Stafford L Lightman
Journal:  Endocrinology       Date:  2011-02-08       Impact factor: 4.736

7.  Neuroendocrine regulation in depression. I. Limbic system-adrenocortical dysfunction.

Authors:  G C Curtis; J Mendels
Journal:  Arch Gen Psychiatry       Date:  1976-09

Review 8.  Current status of cortisol findings in post-traumatic stress disorder.

Authors:  Rachel Yehuda
Journal:  Psychiatr Clin North Am       Date:  2002-06

9.  Deconvolution of episodic hormone data: an analysis of the role of season on the onset of puberty in cows.

Authors:  F O'Sullivan; J O'Sullivan
Journal:  Biometrics       Date:  1988-06       Impact factor: 2.571

10.  Ultradian cortisol pulsatility encodes a distinct, biologically important signal.

Authors:  Andrew McMaster; Maryam Jangani; Paula Sommer; Namshik Han; Andy Brass; Stephen Beesley; Weiqun Lu; Andrew Berry; Andrew Loudon; Rachelle Donn; David W Ray
Journal:  PLoS One       Date:  2011-01-18       Impact factor: 3.240

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