Literature DB >> 23787487

A comparison of methods for analyzing time series of pulsatile hormone data.

N E Carlson1, K W Horton, G K Grunwald.   

Abstract

Many endocrine systems are regulated by pulsatile hormones - hormones that are secreted intermittently in boluses rather than continuously over time. To study pulsatile secretion, blood is drawn every few minutes for an extended period. The result is a time series of hormone concentrations for each individual. The goal is to estimate pulsatile hormone secretion features such as frequency, location, duration, and amount of pulsatile and non-pulsatile secretion and compare these features between groups. Various statistical approaches to analyzing these data have been proposed, but validation has generally focused on one hormone. Thus, we lack a broad understanding of each method's performance. By using simulated data with features seen in reproductive and stress hormones, we investigated the performance of three recently developed statistical approaches for analyzing pulsatile hormone data and compared them to a frequently used deconvolution approach. We found that methods incorporating a changing baseline modeled both constant and changing baseline shapes well; however, the added model flexibility resulted in a slight increase in bias in other model parameters. When pulses were well defined and baseline constant, Bayesian approaches performed similar to the existing deconvolution method. The increase in computation time of Bayesian approaches offered improved estimation and more accurate quantification of estimation variation in situations where pulse locations were not clearly identifiable. Within the class of deconvolution models for fitting pulsatile hormone data, the Bayesian approach with a changing baseline offered adequate results over the widest range of data.
Copyright © 2013 John Wiley & Sons, Ltd.

Entities:  

Keywords:  Bayesian; birth-and-death MCMC; deconvolution; model validation; simulation; spline

Mesh:

Substances:

Year:  2013        PMID: 23787487      PMCID: PMC4535452          DOI: 10.1002/sim.5882

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  25 in total

1.  Deconvolution analysis of hormone data.

Authors:  J D Veldhuis; M L Johnson
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

2.  Does cortisol acting via the type II glucocorticoid receptor mediate suppression of pulsatile luteinizing hormone secretion in response to psychosocial stress?

Authors:  Kellie M Breen; Amy E Oakley; Andrew V Pytiak; Alan J Tilbrook; Elizabeth R Wagenmaker; Fred J Karsch
Journal:  Endocrinology       Date:  2007-01-04       Impact factor: 4.736

3.  Modeling of hormone secretion-generating mechanisms with splines: a pseudo-likelihood approach.

Authors:  Anna Liu; Yuedong Wang
Journal:  Biometrics       Date:  2007-03       Impact factor: 2.571

4.  A comparison of methods that characterize pulses in a time series.

Authors:  D T Mauger; M B Brown; R H Kushler
Journal:  Stat Med       Date:  1995-02-15       Impact factor: 2.373

5.  The temporal relationship between gonadotropin releasing hormone (GnRH) and luteinizing hormone (LH) secretion in ovariectomized ewes.

Authors:  I J Clarke; J T Cummins
Journal:  Endocrinology       Date:  1982-11       Impact factor: 4.736

6.  Attenuated luteinizing hormone (LH) pulse amplitude but normal LH pulse frequency, and its relation to plasma androgens in hypogonadism of obese men.

Authors:  A Vermeulen; J M Kaufman; J P Deslypere; G Thomas
Journal:  J Clin Endocrinol Metab       Date:  1993-05       Impact factor: 5.958

Review 7.  GnRH pulses--the regulators of human reproduction.

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Journal:  Trans Am Clin Climatol Assoc       Date:  1993

8.  Pulsatile luteinizing hormone amplitude and progesterone metabolite excretion are reduced in obese women.

Authors:  Akas Jain; Alex J Polotsky; Dana Rochester; Sarah L Berga; Tammy Loucks; Gohar Zeitlian; Karen Gibbs; Hanah N Polotsky; Sophia Feng; Barbara Isaac; Nanette Santoro
Journal:  J Clin Endocrinol Metab       Date:  2007-04-17       Impact factor: 5.958

9.  Hypothalamic-pituitary-adrenal axis activity in panic disorder. 24-hour secretion of corticotropin and cortisol.

Authors:  J L Abelson; G C Curtis
Journal:  Arch Gen Psychiatry       Date:  1996-04

10.  Deconvolution of episodic hormone data: an analysis of the role of season on the onset of puberty in cows.

Authors:  F O'Sullivan; J O'Sullivan
Journal:  Biometrics       Date:  1988-06       Impact factor: 2.571

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  2 in total

1.  Bayesian analysis improves pulse secretion characterization in reproductive hormones.

Authors:  Huayu Liu; Alex J Polotsky; Gary K Grunwald; Nichole E Carlson
Journal:  Syst Biol Reprod Med       Date:  2017-12-29       Impact factor: 3.061

2.  A population-based approach to analyzing pulses in time series of hormone data.

Authors:  K W Horton; N E Carlson; G K Grunwald; M J Mulvahill; A J Polotsky
Journal:  Stat Med       Date:  2017-04-09       Impact factor: 2.373

  2 in total

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