Literature DB >> 28393373

A population-based approach to analyzing pulses in time series of hormone data.

K W Horton1, N E Carlson2, G K Grunwald2, M J Mulvahill3, A J Polotsky4.   

Abstract

Studies of reproductive physiology involve rapid sampling protocols that result in time series of hormone concentrations. The signature pattern in these times series is pulses of hormone release. Various statistical models for quantifying the pulsatile release features exist. Currently these models are fitted separately to each individual and the resulting estimates averaged to arrive at post hoc population-level estimates. When the signal-to-noise ratio is small or the time of observation is short (e.g., 6 h), this two-stage estimation approach can fail. This work extends the single-subject modelling framework to a population framework similar to what exists for complex pharamacokinetics data. The goal is to leverage information across subjects to more clearly identify pulse locations and improve estimation of other model parameters. This modelling extension has proven difficult because the pulse number and locations are unknown. Here, we show that simultaneously modelling a group of subjects is computationally feasible in a Bayesian framework using a birth-death Markov chain Monte Carlo estimation algorithm. Via simulation, we show that this population-based approach reduces the false positive and negative pulse detection rates and results in less biased estimates of population-level parameters of frequency, pulse size, and hormone elimination. We then apply the approach to a reproductive study in healthy women where approximately one-third of the 21 subjects in the study did not have appropriate fits using the single-subject fitting approach. Using the population model produced more precise, biologically plausible estimates of all model parameters.
Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

Entities:  

Keywords:  Bayesian; birth-and-death MCMC; hierarchical models; luteinizing hormone; reproductive hormones

Mesh:

Substances:

Year:  2017        PMID: 28393373      PMCID: PMC5616190          DOI: 10.1002/sim.7292

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  22 in total

1.  Bayesian deconvolution analysis of pulsatile hormone concentration profiles.

Authors:  Timothy D Johnson
Journal:  Biometrics       Date:  2003-09       Impact factor: 2.571

2.  Deconvolution analysis of hormone data.

Authors:  J D Veldhuis; M L Johnson
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

3.  Modeling of hormone secretion-generating mechanisms with splines: a pseudo-likelihood approach.

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Journal:  Biometrics       Date:  2007-03       Impact factor: 2.571

4.  Detecting pulsatile hormone secretions using nonlinear mixed effects partial spline models.

Authors:  Yu-Chieh Yang; Anna Liu; Yuedong Wang
Journal:  Biometrics       Date:  2006-03       Impact factor: 2.571

5.  Women's reproductive health: the role of body mass index in early and adult life.

Authors:  J K Lake; C Power; T J Cole
Journal:  Int J Obes Relat Metab Disord       Date:  1997-06

6.  A comparison of methods that characterize pulses in a time series.

Authors:  D T Mauger; M B Brown; R H Kushler
Journal:  Stat Med       Date:  1995-02-15       Impact factor: 2.373

7.  Estradiol Priming Improves Gonadotrope Sensitivity and Pro-Inflammatory Cytokines in Obese Women.

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Journal:  J Clin Endocrinol Metab       Date:  2015-10-01       Impact factor: 5.958

Review 8.  Maternal obesity and fetal metabolic programming: a fertile epigenetic soil.

Authors:  Margaret J R Heerwagen; Melissa R Miller; Linda A Barbour; Jacob E Friedman
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2010-07-14       Impact factor: 3.619

9.  AutoDecon: a robust numerical method for the quantification of pulsatile events.

Authors:  Michael L Johnson; Lenore Pipes; Paula P Veldhuis; Leon S Farhy; Ralf Nass; Michael O Thorner; William S Evans
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

10.  Deconvolution of episodic hormone data: an analysis of the role of season on the onset of puberty in cows.

Authors:  F O'Sullivan; J O'Sullivan
Journal:  Biometrics       Date:  1988-06       Impact factor: 2.571

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  3 in total

1.  Modeling associations between latent event processes governing time series of pulsing hormones.

Authors:  Huayu Liu; Nichole E Carlson; Gary K Grunwald; Alex J Polotsky
Journal:  Biometrics       Date:  2017-10-31       Impact factor: 2.571

2.  Epidemiology of Severe Acute Respiratory Infection (SARI) Cases at a sentinel site in Egypt, 2013-15.

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Journal:  J Public Health (Oxf)       Date:  2020-08-18       Impact factor: 2.341

Review 3.  Measurement of Pulsatile Insulin Secretion: Rationale and Methodology.

Authors:  Marcello C Laurenti; Aleksey Matveyenko; Adrian Vella
Journal:  Metabolites       Date:  2021-06-22
  3 in total

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