Literature DB >> 14581221

Perturbation of protein tertiary structure in frozen solutions revealed by 1-anilino-8-naphthalene sulfonate fluorescence.

Edi Gabellieri1, Giovanni B Strambini.   

Abstract

Although freeze-induced perturbations of the protein native fold are common, the underlying mechanism is poorly understood owing to the difficulty of monitoring their structure in ice. In this report we propose that binding of the fluorescence probe 1-anilino-8-naphthalene sulfonate (ANS) to proteins in ice can provide a useful monitor of ice-induced strains on the native fold. Experiments conducted with copper-free azurin from Pseudomonas aeruginosa, as a model protein system, demonstrate that in frozen solutions the fluorescence of ANS is enhanced several fold and becomes blue shifted relative free ANS. From the enhancement factor it is estimated that, at -13 degrees C, on average at least 1.6 ANS molecules become immobilized within hydrophobic sites of apo-azurin, sites that are destroyed when the structure is largely unfolded by guanidinium hydrochloride. The extent of ANS binding is influenced by temperature of ice as well as by conditions that affect the stability of the globular structure. Lowering the temperature from -4 degrees C to -18 degrees C leads to an apparent increase in the number of binding sites, an indication that low temperature and /or a reduced amount of liquid water augment the strain on the protein tertiary structure. It is significant that ANS binding is practically abolished when the native fold is stabilized upon formation of the Cd(2+) complex or on addition of glycerol to the solution but is further enhanced in the presence of NaSCN, a known destabilizing agent. The results of the present study suggest that the ANS binding method may find practical utility in testing the effectiveness of various additives employed in protein formulations as well as to devise safer freeze-drying protocols of pharmaceutical proteins.

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Year:  2003        PMID: 14581221      PMCID: PMC1303597          DOI: 10.1016/S0006-3495(03)74739-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  18 in total

1.  Counteracting effects of thiocyanate and sucrose on chymotrypsinogen secondary structure and aggregation during freezing, drying, and rehydration.

Authors:  S D Allison; A Dong; J F Carpenter
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

2.  Proteins in frozen solutions: evidence of ice-induced partial unfolding.

Authors:  G B Strambini; E Gabellieri
Journal:  Biophys J       Date:  1996-02       Impact factor: 4.033

3.  Characterization of the sources of protein-ligand affinity: 1-sulfonato-8-(1')anilinonaphthalene binding to intestinal fatty acid binding protein.

Authors:  W R Kirk; E Kurian; F G Prendergast
Journal:  Biophys J       Date:  1996-01       Impact factor: 4.033

4.  A partially folded intermediate during tubulin unfolding: its detection and spectroscopic characterization.

Authors:  S Guha; B Bhattacharyya
Journal:  Biochemistry       Date:  1995-05-30       Impact factor: 3.162

5.  Characterization of a urea induced molten globule intermediate state of glutaminyl-tRNA synthetase from Escherichia coli.

Authors:  B K Das; T Bhattacharyya; S Roy
Journal:  Biochemistry       Date:  1995-04-18       Impact factor: 3.162

6.  Crystal structure of Pseudomonas aeruginosa apo-azurin at 1.85 A resolution.

Authors:  H Nar; A Messerschmidt; R Huber; M van de Kamp; G W Canters
Journal:  FEBS Lett       Date:  1992-07-20       Impact factor: 4.124

7.  Use of fluorescence decay times of 8-ANS-protein complexes to study the conformational transitions in proteins which unfold through the molten globule state.

Authors:  V N Uversky; S Winter; G Löber
Journal:  Biophys Chem       Date:  1996-06-11       Impact factor: 2.352

8.  1-Anilino-8-naphthalene sulfonate anion-protein binding depends primarily on ion pair formation.

Authors:  D Matulis; R Lovrien
Journal:  Biophys J       Date:  1998-01       Impact factor: 4.033

9.  Phosphorescence lifetime of tryptophan in proteins.

Authors:  M Gonnelli; G B Strambini
Journal:  Biochemistry       Date:  1995-10-24       Impact factor: 3.162

10.  Crystal structure analysis of oxidized Pseudomonas aeruginosa azurin at pH 5.5 and pH 9.0. A pH-induced conformational transition involves a peptide bond flip.

Authors:  H Nar; A Messerschmidt; R Huber; M van de Kamp; G W Canters
Journal:  J Mol Biol       Date:  1991-10-05       Impact factor: 5.469

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  13 in total

1.  Protein stability in ice.

Authors:  Giovanni B Strambini; Margherita Gonnelli
Journal:  Biophys J       Date:  2006-12-22       Impact factor: 4.033

2.  Thermodynamic Analysis of Thermal Hysteresis: Mechanistic Insights into Biological Antifreezes.

Authors:  Sen Wang; Natapol Amornwittawat; Xin Wen
Journal:  J Chem Thermodyn       Date:  2012-05-07       Impact factor: 3.178

3.  Probing the role of proline -135 on the structure, stability, and cell proliferation activity of human acidic fibroblast growth factor.

Authors:  Julie Eberle Davis; Arwa Alghanmi; Ravi Kumar Gundampati; Srinivas Jayanthi; Ellen Fields; Monica Armstrong; Vanessa Weidling; Varun Shah; Shilpi Agrawal; Bhanu Prasanth Koppolu; David A Zaharoff; Thallapuranam Krishnaswamy Suresh Kumar
Journal:  Arch Biochem Biophys       Date:  2018-07-19       Impact factor: 4.013

4.  ANS fluorescence detects widespread perturbations of protein tertiary structure in ice.

Authors:  Edi Gabellieri; Giovanni B Strambini
Journal:  Biophys J       Date:  2006-02-03       Impact factor: 4.033

Review 5.  Characterizing Protein Structure, Dynamics and Conformation in Lyophilized Solids.

Authors:  Balakrishnan S Moorthy; Lavanya K Iyer; Elizabeth M Topp
Journal:  Curr Pharm Des       Date:  2015       Impact factor: 3.116

6.  Freeze-thaw cycles as drivers of complex ribozyme assembly.

Authors:  Hannes Mutschler; Aniela Wochner; Philipp Holliger
Journal:  Nat Chem       Date:  2015-05-04       Impact factor: 24.427

7.  Sorbitol crystallization can lead to protein aggregation in frozen protein formulations.

Authors:  Deirdre Murphy Piedmonte; Christie Summers; Arnold McAuley; Lejla Karamujic; Gayathri Ratnaswamy
Journal:  Pharm Res       Date:  2006-11-16       Impact factor: 4.580

8.  Alpha-2-Macroglobulin Is Acutely Sensitive to Freezing and Lyophilization: Implications for Structural and Functional Studies.

Authors:  Amy R Wyatt; Janet R Kumita; Natalie E Farrawell; Christopher M Dobson; Mark R Wilson
Journal:  PLoS One       Date:  2015-06-23       Impact factor: 3.240

Review 9.  Extrinsic fluorescent dyes as tools for protein characterization.

Authors:  Andrea Hawe; Marc Sutter; Wim Jiskoot
Journal:  Pharm Res       Date:  2008-01-03       Impact factor: 4.200

10.  Function, structure, and stability of enzymes confined in agarose gels.

Authors:  Jeffrey Kunkel; Prashanth Asuri
Journal:  PLoS One       Date:  2014-01-21       Impact factor: 3.240

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