Literature DB >> 16461396

ANS fluorescence detects widespread perturbations of protein tertiary structure in ice.

Edi Gabellieri1, Giovanni B Strambini.   

Abstract

Freeze-induced perturbations of the protein native fold are poorly understood owing to the difficulty of monitoring their structure in ice. Here, we report that binding of the fluorescence probe 1-anilino-8-naphthalene sulfonate (ANS) to proteins in ice can provide a general monitor of ice-induced alterations of their tertiary structure. Experiments conducted with copper-free azurin from Pseudomonas aeruginosa and mutants I7S, F110S, and C3A/C26A correlate the magnitude of the ice-induced perturbation, as inferred from the extent of ANS binding, to the plasticity of the globular fold, increasing with less stable globular folds as well as when the flexibility of the macromolecule is enhanced. The distortion of the native structure inferred from ANS binding was found to draw a parallel with the extent of irreversible denaturation by freeze-thawing, suggesting that these altered conformations play a direct role on freeze damage. ANS binding experiments, extended to a set of proteins including serum albumin, alpha-amylase, beta-galactosidase, alcohol dehydrogenase from horse liver, alcohol dehydrogenase from yeast, lactic dehydrogenase, and aldolase, confirmed that a stressed condition of the native fold in the frozen state appears to be general to most proteins and pointed out that oligomers tend to be more labile than monomers presumably because the globular fold can be further destabilized by subunit dissociation. The results of this study suggest that the ANS binding method may find practical utility in testing the effectiveness of various additives employed in protein formulations as well as to devise safer freeze-drying protocols of pharmaceutical proteins.

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Year:  2006        PMID: 16461396      PMCID: PMC1432122          DOI: 10.1529/biophysj.105.074948

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  28 in total

1.  Dynamics of ANS binding to tuna apomyoglobin measured with fluorescence correlation spectroscopy.

Authors:  E Bismuto; E Gratton; D C Lamb
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Effects of cavity-forming mutations on the internal dynamics of azurin.

Authors:  Patrizia Cioni; Ellen de Waal; Gerard W Canters; Giovanni B Strambini
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

3.  Effect of process conditions on recovery of protein activity after freezing and freeze-drying.

Authors:  S Jiang; S L Nail
Journal:  Eur J Pharm Biopharm       Date:  1998-05       Impact factor: 5.571

4.  Counteracting effects of thiocyanate and sucrose on chymotrypsinogen secondary structure and aggregation during freezing, drying, and rehydration.

Authors:  S D Allison; A Dong; J F Carpenter
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

5.  The effect of pressure and guanidine hydrochloride on azurins mutated in the hydrophobic core.

Authors:  G Mei; A Di Venere; F M Campeggi; G Gilardi; N Rosato; F De Matteis; A Finazzi-Agrò
Journal:  Eur J Biochem       Date:  1999-10

6.  Effects of sucrose on the internal dynamics of azurin.

Authors:  Patrizia Cioni; Emilia Bramanti; Giovanni B Strambini
Journal:  Biophys J       Date:  2005-03-25       Impact factor: 4.033

7.  The interaction of a naphthalene dye with apomyoglobin and apohemoglobin. A fluorescent probe of non-polar binding sites.

Authors:  L Stryer
Journal:  J Mol Biol       Date:  1965-09       Impact factor: 5.469

8.  Protein denaturation during freezing and thawing in phosphate buffer systems: monomeric and tetrameric beta-galactosidase.

Authors:  K A Pikal-Cleland; N Rodríguez-Hornedo; G L Amidon; J F Carpenter
Journal:  Arch Biochem Biophys       Date:  2000-12-15       Impact factor: 4.013

9.  Crystal structure of the disulfide bond-deficient azurin mutant C3A/C26A: how important is the S-S bond for folding and stability?

Authors:  N Bonander; J Leckner; H Guo; B G Karlsson; L Sjölin
Journal:  Eur J Biochem       Date:  2000-07

10.  Perturbation of protein tertiary structure in frozen solutions revealed by 1-anilino-8-naphthalene sulfonate fluorescence.

Authors:  Edi Gabellieri; Giovanni B Strambini
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

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  11 in total

1.  Cryoprotective mechanism of a small intrinsically disordered dehydrin protein.

Authors:  Stephanie Hughes; Steffen P Graether
Journal:  Protein Sci       Date:  2011-01       Impact factor: 6.725

2.  Protein stability in ice.

Authors:  Giovanni B Strambini; Margherita Gonnelli
Journal:  Biophys J       Date:  2006-12-22       Impact factor: 4.033

3.  New methods allowing the detection of protein aggregates: a case study on trastuzumab.

Authors:  Barthélemy Demeule; Caroline Palais; Gia Machaidze; Robert Gurny; Tudor Arvinte
Journal:  MAbs       Date:  2009-03-11       Impact factor: 5.857

4.  A new approach to explore the impact of freeze-thaw cycling on protein structure: hydrogen/deuterium exchange mass spectrometry (HX-MS).

Authors:  Aming Zhang; Wei Qi; Satish K Singh; Erik J Fernandez
Journal:  Pharm Res       Date:  2011-02-08       Impact factor: 4.200

5.  Beyond glass transitions: studying the highly viscous and elastic behavior of frozen protein formulations using low temperature rheology and its potential implications on protein stability.

Authors:  Jian Hua Gu; Alice Beekman; Tian Wu; Deirdre Murphy Piedmonte; Priti Baker; Michael Eschenberg; Michael Hale; Merrill Goldenberg
Journal:  Pharm Res       Date:  2012-10-16       Impact factor: 4.200

6.  The K-segments of the wheat dehydrin DHN-5 are essential for the protection of lactate dehydrogenase and β-glucosidase activities in vitro.

Authors:  Marwa Drira; Walid Saibi; Faïçal Brini; Ali Gargouri; Khaled Masmoudi; Moez Hanin
Journal:  Mol Biotechnol       Date:  2013-06       Impact factor: 2.695

7.  Alpha-2-Macroglobulin Is Acutely Sensitive to Freezing and Lyophilization: Implications for Structural and Functional Studies.

Authors:  Amy R Wyatt; Janet R Kumita; Natalie E Farrawell; Christopher M Dobson; Mark R Wilson
Journal:  PLoS One       Date:  2015-06-23       Impact factor: 3.240

8.  Effects of freezing rate on structural changes in L-lactate dehydrogenase during the freezing process.

Authors:  Haena Park; Jun-Young Park; Kyung-Min Park; Pahn-Shick Chang
Journal:  Sci Rep       Date:  2021-07-01       Impact factor: 4.379

Review 9.  Extrinsic fluorescent dyes as tools for protein characterization.

Authors:  Andrea Hawe; Marc Sutter; Wim Jiskoot
Journal:  Pharm Res       Date:  2008-01-03       Impact factor: 4.200

10.  Therapeutic implication of L-phenylalanine aggregation mechanism and its modulation by D-phenylalanine in phenylketonuria.

Authors:  Virender Singh; Ratan Kumar Rai; Ashish Arora; Neeraj Sinha; Ashwani Kumar Thakur
Journal:  Sci Rep       Date:  2014-01-27       Impact factor: 4.379

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