Literature DB >> 1339023

Brønsted analysis of aspartate aminotransferase via exogenous catalysis of reactions of an inactive mutant.

M D Toney1, J F Kirsch.   

Abstract

Primary amines functionally replace lysine 258 by catalyzing both the 1,3-prototropic shift and external aldimine hydrolysis reactions with the inactive aspartate aminotransferase mutant K258A. This finding allows classical Brønsted analyses of proton transfer reactions to be applied to enzyme-catalyzed reactions. An earlier study of the reaction of K258A with cysteine sulfinate (Toney, M.D. & Kirsch, J.F., 1989, Science 243, 1485) provided a beta value of 0.4 for the 1,3-prototropic shift. The beta value reported here for the transamination of oxalacetate to aspartate is 0.6. The catalytic efficacy of primary amines is largely determined by basicity and molecular volume. The dependence of the rate constants for the reactions of K258A and K258M on amine molecular volume is nearly identical. This observation argues that the alkyl groups of the added amines do not occupy the position of the lysine 258 side chain in the wild type enzyme. Large primary C alpha and insignificant solvent deuterium kinetic isotope effects with amino acid substrates demonstrate that the amine nitrogen of the exogenous catalysts directly abstracts the labile proton in the rate-determining step.

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Year:  1992        PMID: 1339023      PMCID: PMC2142083          DOI: 10.1002/pro.5560010111

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  25 in total

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Authors:  L SCHIRCH; W T JENKINS
Journal:  J Biol Chem       Date:  1964-11       Impact factor: 5.157

2.  Direct Brønsted analysis of the restoration of activity to a mutant enzyme by exogenous amines.

Authors:  M D Toney; J F Kirsch
Journal:  Science       Date:  1989-03-17       Impact factor: 47.728

3.  The stereospecific labilization of the C-4' pro-S hydrogen of pyridoxamine 5'-phosphate is abolished in (Lys258----Ala) aspartate aminotransferase.

Authors:  S Kochhar; W L Finlayson; J F Kirsch; P Christen
Journal:  J Biol Chem       Date:  1987-08-25       Impact factor: 5.157

4.  2.8-A-resolution crystal structure of an active-site mutant of aspartate aminotransferase from Escherichia coli.

Authors:  D L Smith; S C Almo; M D Toney; D Ringe
Journal:  Biochemistry       Date:  1989-10-03       Impact factor: 3.162

5.  Conformation and reaction specificity in pyridoxal phosphate enzymes.

Authors:  H C Dunathan
Journal:  Proc Natl Acad Sci U S A       Date:  1966-04       Impact factor: 11.205

Review 6.  The expression of isotope effects on enzyme-catalyzed reactions.

Authors:  D B Northrop
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

7.  Pre-steady-state kinetics of Escherichia coli aspartate aminotransferase catalyzed reactions and thermodynamic aspects of its substrate specificity.

Authors:  S Kuramitsu; K Hiromi; H Hayashi; Y Morino; H Kagamiyama
Journal:  Biochemistry       Date:  1990-06-12       Impact factor: 3.162

8.  Isotope effects and structure-reactivity correlations in the yeast alcohol dehydrogenase reaction. A study of the enzyme-catalyzed oxidation of aromatic alcohols.

Authors:  J P Klinman
Journal:  Biochemistry       Date:  1976-05-04       Impact factor: 3.162

9.  Demonstration of a functional requirement for the carbamate nitrogen of ribulosebisphosphate carboxylase/oxygenase by chemical rescue.

Authors:  H B Smith; F C Hartman
Journal:  Biochemistry       Date:  1991-05-28       Impact factor: 3.162

10.  General base catalysis in a glutamine for histidine mutant at position 51 of human liver alcohol dehydrogenase.

Authors:  T Ehrig; T D Hurley; H J Edenberg; W F Bosron
Journal:  Biochemistry       Date:  1991-01-29       Impact factor: 3.162

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  14 in total

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Authors:  J V Krishna Rao; J R Jagath; B Sharma; N Appaji Rao; H S Savithri
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2.  Structure-function relationships in the hammerhead ribozyme probed by base rescue.

Authors:  A Peracchi; J Matulic-Adamic; S Wang; L Beigelman; D Herschlag
Journal:  RNA       Date:  1998-11       Impact factor: 4.942

3.  Modification of residue 42 of the active site loop with a lysine-mimetic side chain rescues isochorismate-pyruvate lyase activity in Pseudomonas aeruginosa PchB.

Authors:  José Olucha; Kathleen M Meneely; Audrey L Lamb
Journal:  Biochemistry       Date:  2012-09-12       Impact factor: 3.162

4.  Light-enhanced catalysis by pyridoxal phosphate-dependent aspartate aminotransferase.

Authors:  Melissa P Hill; Elizabeth C Carroll; Mai C Vang; Trevor A Addington; Michael D Toney; Delmar S Larsen
Journal:  J Am Chem Soc       Date:  2010-11-08       Impact factor: 15.419

5.  Single versus parallel pathways of protein folding and fractional formation of structure in the transition state.

Authors:  A R Fersht; L S Itzhaki; N F elMasry; J M Matthews; D E Otzen
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

6.  Ground-state electronic destabilization via hyperconjugation in aspartate aminotransferase.

Authors:  Wait R Griswold; Joan Nieto Castro; Andrew J Fisher; Michael D Toney
Journal:  J Am Chem Soc       Date:  2012-05-10       Impact factor: 15.419

7.  Rescue of K12G triosephosphate isomerase by ammonium cations: the reaction of an enzyme in pieces.

Authors:  Maybelle K Go; Tina L Amyes; John P Richard
Journal:  J Am Chem Soc       Date:  2010-09-29       Impact factor: 15.419

8.  The use of natural and unnatural amino acid substrates to define the substrate specificity differences of Escherichia coli aspartate and tyrosine aminotransferases.

Authors:  J J Onuffer; B T Ton; I Klement; J F Kirsch
Journal:  Protein Sci       Date:  1995-09       Impact factor: 6.725

9.  Evaluating the potential for halogen bonding in the oxyanion hole of ketosteroid isomerase using unnatural amino acid mutagenesis.

Authors:  Daniel A Kraut; Michael J Churchill; Phillip E Dawson; Daniel Herschlag
Journal:  ACS Chem Biol       Date:  2009-04-17       Impact factor: 5.100

10.  Controlling Enzymatic Activity by Modulating the Oligomerization State via Chemical Rescue and Optical Control.

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Journal:  Chembiochem       Date:  2021-10-22       Impact factor: 3.461

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