Literature DB >> 1325384

Isolation and characterization of SUA5, a novel gene required for normal growth in Saccharomyces cerevisiae.

J G Na1, I Pinto, M Hampsey.   

Abstract

We have identified the sua5 locus as a suppressor of an aberrant ATG codon located in the leader region of the cyc1 gene. The sua5-1 allele enhances the iso-1-cytochrome c steady state level in the cyc1-1019 mutant from 2% to approximately 60% of normal (Cyc+) and also confers a marked slow growth (Slg-) phenotype. Suppression is not a consequence of altered transcription initiation at the cyc1 locus. The SUA5 wild-type gene was isolated and sequenced, revealing an open reading frame (ORF) encoding a potential protein of 46,537 Da. SUA5 transcript analyses were consistent with expression of the predicted ORF and Sua5 antisera detected a protein with an apparent molecular mass of 44 kDa. SUA5 was mapped to chromosome VII, immediately adjacent to the PMR1 gene. Hybridization analysis revealed the presence of a related gene on chromosome XII. Neither the SUA5 DNA sequence nor deduced amino acid sequence showed homology to any sequences in the data banks. Disruption of SUA5 conferred the same Cyc+ and Slg- phenotypes as the sua5-1 suppressor, which is the result of a missense mutation, encoding a Ser107----Phe replacement. In addition, sua5 null mutants lack cytochrome a.a3 and fail to grow on lactate or glycerol medium. These results define SUA5 as a new gene encoding a novel protein that is necessary for normal cell growth.

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Year:  1992        PMID: 1325384      PMCID: PMC1205092     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  31 in total

1.  High-expression vectors with multiple cloning sites for construction of trpE fusion genes: pATH vectors.

Authors:  T J Koerner; J E Hill; A M Myers; A Tzagoloff
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

2.  The suil suppressor locus in Saccharomyces cerevisiae encodes a translation factor that functions during tRNA(iMet) recognition of the start codon.

Authors:  H J Yoon; T F Donahue
Journal:  Mol Cell Biol       Date:  1992-01       Impact factor: 4.272

Review 3.  Prenyl proteins in eukaryotic cells: a new type of membrane anchor.

Authors:  J A Glomset; M H Gelb; C C Farnsworth
Journal:  Trends Biochem Sci       Date:  1990-04       Impact factor: 13.807

Review 4.  Messenger RNA stability in yeast.

Authors:  A J Brown
Journal:  Yeast       Date:  1989 Jul-Aug       Impact factor: 3.239

5.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

6.  Eviction and transplacement of mutant genes in yeast.

Authors:  F Winston; F Chumley; G R Fink
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

7.  Amino acid replacements in yeast iso-1-cytochrome c. Comparison with the phylogenetic series and the tertiary structure of related cytochromes c.

Authors:  D M Hampsey; G Das; F Sherman
Journal:  J Biol Chem       Date:  1986-03-05       Impact factor: 5.157

8.  DNA sequence and characterization of the S. cerevisiae gene encoding adenylate cyclase.

Authors:  T Kataoka; D Broek; M Wigler
Journal:  Cell       Date:  1985-12       Impact factor: 41.582

9.  A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.

Authors:  R S Sikorski; P Hieter
Journal:  Genetics       Date:  1989-05       Impact factor: 4.562

Review 10.  The scanning model for translation: an update.

Authors:  M Kozak
Journal:  J Cell Biol       Date:  1989-02       Impact factor: 10.539

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  28 in total

1.  Isolation and identification of a novel cDNA that encodes human yrdC protein.

Authors:  Jinzhong Chen; Chaoneng Ji; Shaohua Gu; Enpeng Zhao; Jianliang Dai; Lu Huang; Ji Qian; Kang Ying; Yi Xie; Yumin Mao
Journal:  J Hum Genet       Date:  2003-03-01       Impact factor: 3.172

2.  cis- and trans-acting suppressors of a translation initiation defect at the cyc1 locus of Saccharomyces cerevisiae.

Authors:  I Pinto; J G Na; F Sherman; M Hampsey
Journal:  Genetics       Date:  1992-09       Impact factor: 4.562

Review 3.  'Conserved hypothetical' proteins: prioritization of targets for experimental study.

Authors:  Michael Y Galperin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2004-10-12       Impact factor: 16.971

4.  The highly conserved KEOPS/EKC complex is essential for a universal tRNA modification, t6A.

Authors:  Madhusudhan Srinivasan; Preeti Mehta; Yao Yu; Evelyn Prugar; Eugene V Koonin; A Wali Karzai; Rolf Sternglanz
Journal:  EMBO J       Date:  2010-12-24       Impact factor: 11.598

5.  Ischemia/Reperfusion-inducible protein modulates the function of organic cation transporter 1 and multidrug and toxin extrusion 1.

Authors:  Qing Li; Hyekyung Yang; Xiujuan Peng; Dong Guo; Zhongqi Dong; James E Polli; Yan Shu
Journal:  Mol Pharm       Date:  2013-06-03       Impact factor: 4.939

6.  Low-molecular-weight protein tyrosine phosphatases of Bacillus subtilis.

Authors:  Lucia Musumeci; Cristina Bongiorni; Lutz Tautz; Robert A Edwards; Andrei Osterman; Marta Perego; Tomas Mustelin; Nunzio Bottini
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

7.  Codon-specific effects of tRNA anticodon loop modifications on translational misreading errors in the yeast Saccharomyces cerevisiae.

Authors:  Kartikeya Joshi; Monika J Bhatt; Philip J Farabaugh
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

8.  The structure of the yrdC gene product from Escherichia coli reveals a new fold and suggests a role in RNA binding.

Authors:  M Teplova; V Tereshko; R Sanishvili; A Joachimiak; T Bushueva; W F Anderson; M Egli
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

9.  The Sua5 protein is essential for normal translational regulation in yeast.

Authors:  Changyi A Lin; Steven R Ellis; Heather L True
Journal:  Mol Cell Biol       Date:  2010-01       Impact factor: 4.272

10.  The universal YrdC/Sua5 family is required for the formation of threonylcarbamoyladenosine in tRNA.

Authors:  Basma El Yacoubi; Benjamin Lyons; Yulien Cruz; Robert Reddy; Brian Nordin; Fabio Agnelli; James R Williamson; Paul Schimmel; Manal A Swairjo; Valérie de Crécy-Lagard
Journal:  Nucleic Acids Res       Date:  2009-03-13       Impact factor: 16.971

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