Literature DB >> 19884342

The Sua5 protein is essential for normal translational regulation in yeast.

Changyi A Lin1, Steven R Ellis, Heather L True.   

Abstract

The anticodon stem-loop of tRNAs requires extensive posttranscriptional modifications in order to maintain structure and stabilize the codon-anticodon interaction. These modifications also play a role in accommodating wobble, allowing a limited pool of tRNAs to recognize degenerate codons. Of particular interest is the formation of a threonylcarbamoyl group on adenosine 37 (t(6)A(37)) of tRNAs that recognize ANN codons. Located adjacent and 3' to the anticodon, t(6)A(37) is a conserved modification that is critical for reading frame maintenance. Recently, the highly conserved YrdC/Sua5 family of proteins was shown to be required for the formation of t(6)A(37). Sua5 was originally identified in a screen by virtue of its ability to affect expression from an aberrant upstream AUG codon in the cyc1 transcript. Together, these findings implicate Sua5 in protein translation at the level of codon recognition. Here, we show that Sua5 is critical for normal translation. The loss of SUA5 causes increased leaky scanning through AUG codons, +1 frameshifting, and nonsense suppression. In addition, the loss of SUA5 amplifies the 20S RNA virus found in Saccharomyces cerevisiae, possibly through an internal ribosome entry site-mediated mechanism. This study reveals a critical role for Sua5 and the t(6)A(37) modification in translational fidelity.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 19884342      PMCID: PMC2798302          DOI: 10.1128/MCB.00754-09

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  66 in total

Review 1.  Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs.

Authors:  H Beier; M Grimm
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

2.  A cystic fibrosis patient with two novel mutations in mitochondrial DNA: mild disease led to delayed diagnosis of both disorders.

Authors:  Lee-Jun C Wong; Min-Hui Liang; Haeyoung Kwon; Ren-Kui Bai; Ozgül Alper; Andrea Gropman
Journal:  Am J Med Genet       Date:  2002-11-15

3.  A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast.

Authors:  U Gueldener; J Heinisch; G J Koehler; D Voss; J H Hegemann
Journal:  Nucleic Acids Res       Date:  2002-03-15       Impact factor: 16.971

4.  The structure of the yrdC gene product from Escherichia coli reveals a new fold and suggests a role in RNA binding.

Authors:  M Teplova; V Tereshko; R Sanishvili; A Joachimiak; T Bushueva; W F Anderson; M Egli
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

5.  Influence of modification next to the anticodon in tRNA on codon context sensitivity of translational suppression and accuracy.

Authors:  F Bouadloun; T Srichaiyo; L A Isaksson; G R Björk
Journal:  J Bacteriol       Date:  1986-06       Impact factor: 3.490

Review 6.  The art and design of genetic screens: yeast.

Authors:  S L Forsburg
Journal:  Nat Rev Genet       Date:  2001-09       Impact factor: 53.242

7.  Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.

Authors:  C Yarian; M Marszalek; E Sochacka; A Malkiewicz; R Guenther; A Miskiewicz; P F Agris
Journal:  Biochemistry       Date:  2000-11-07       Impact factor: 3.162

8.  Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.

Authors:  J W Stuart; Z Gdaniec; R Guenther; M Marszalek; E Sochacka; A Malkiewicz; P F Agris
Journal:  Biochemistry       Date:  2000-11-07       Impact factor: 3.162

9.  A hierarchy of trans-acting factors modulates translation of an activator of amino acid biosynthetic genes in Saccharomyces cerevisiae.

Authors:  A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1985-09       Impact factor: 4.272

Review 10.  Pushing the limits of the scanning mechanism for initiation of translation.

Authors:  Marilyn Kozak
Journal:  Gene       Date:  2002-10-16       Impact factor: 3.688

View more
  40 in total

1.  The highly conserved KEOPS/EKC complex is essential for a universal tRNA modification, t6A.

Authors:  Madhusudhan Srinivasan; Preeti Mehta; Yao Yu; Evelyn Prugar; Eugene V Koonin; A Wali Karzai; Rolf Sternglanz
Journal:  EMBO J       Date:  2010-12-24       Impact factor: 11.598

2.  NMR-based Structural Analysis of Threonylcarbamoyl-AMP Synthase and Its Substrate Interactions.

Authors:  Kimberly A Harris; Benjamin G Bobay; Kathryn L Sarachan; Alexis F Sims; Yann Bilbille; Christopher Deutsch; Dirk Iwata-Reuyl; Paul F Agris
Journal:  J Biol Chem       Date:  2015-06-09       Impact factor: 5.157

3.  Ischemia/Reperfusion-inducible protein modulates the function of organic cation transporter 1 and multidrug and toxin extrusion 1.

Authors:  Qing Li; Hyekyung Yang; Xiujuan Peng; Dong Guo; Zhongqi Dong; James E Polli; Yan Shu
Journal:  Mol Pharm       Date:  2013-06-03       Impact factor: 4.939

4.  Biosynthesis of threonylcarbamoyl adenosine (t6A), a universal tRNA nucleoside.

Authors:  Christopher Deutsch; Basma El Yacoubi; Valérie de Crécy-Lagard; Dirk Iwata-Reuyl
Journal:  J Biol Chem       Date:  2012-02-29       Impact factor: 5.157

5.  Codon-specific effects of tRNA anticodon loop modifications on translational misreading errors in the yeast Saccharomyces cerevisiae.

Authors:  Kartikeya Joshi; Monika J Bhatt; Philip J Farabaugh
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

6.  Engineering Saccharomyces cerevisiae for improvement in ethanol tolerance by accumulation of trehalose.

Authors:  Nileema R Divate; Gen-Hung Chen; Pei-Ming Wang; Bor-Rung Ou; Yun-Chin Chung
Journal:  Bioengineered       Date:  2016-08-02       Impact factor: 3.269

7.  Structure of a reaction intermediate mimic in t6A biosynthesis bound in the active site of the TsaBD heterodimer from Escherichia coli.

Authors:  Brett J Kopina; Sophia Missoury; Bruno Collinet; Mark G Fulton; Charles Cirio; Herman van Tilbeurgh; Charles T Lauhon
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

Review 8.  Pathways to disease from natural variations in human cytoplasmic tRNAs.

Authors:  Jeremy T Lant; Matthew D Berg; Ilka U Heinemann; Christopher J Brandl; Patrick O'Donoghue
Journal:  J Biol Chem       Date:  2019-01-14       Impact factor: 5.157

9.  A cyclic form of N6-threonylcarbamoyladenosine as a widely distributed tRNA hypermodification.

Authors:  Kenjyo Miyauchi; Satoshi Kimura; Tsutomu Suzuki
Journal:  Nat Chem Biol       Date:  2012-12-16       Impact factor: 15.040

10.  The role of wobble uridine modifications in +1 translational frameshifting in eukaryotes.

Authors:  Hasan Tükenmez; Hao Xu; Anders Esberg; Anders S Byström
Journal:  Nucleic Acids Res       Date:  2015-08-17       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.