Literature DB >> 12972547

Ectopic expression of atRSZ33 reveals its function in splicing and causes pleiotropic changes in development.

Maria Kalyna1, Sergiy Lopato, Andrea Barta.   

Abstract

Splicing provides an additional level in the regulation of gene expression and contributes to proteome diversity. Herein, we report the functional characterization of a recently described plant-specific protein, atRSZ33, which has characteristic features of a serine/arginine-rich protein and the ability to interact with other splicing factors, implying that this protein might be involved in constitutive and/or alternative splicing. Overexpression of atRSZ33 leads to alteration of splicing patterns of atSRp30 and atSRp34/SR1, indicating that atRSZ33 is indeed a splicing factor. Moreover, atRSZ33 is a regulator of its own expression, as splicing of its pre-mRNA is changed in transgenic plants. Investigations by promoter-beta-glucuronidase (GUS) fusion and in situ hybridization revealed that atRSZ33 is expressed during embryogenesis and early stages of seedling formation, as well as in flower and root development. Ectopic expression of atRSZ33 caused pleiotropic changes in plant development resulting in increased cell expansion and changed polarization of cell elongation and division. In addition, changes in activity of an auxin-responsive promoter suggest that auxin signaling is disturbed in these transgenic plants.

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Year:  2003        PMID: 12972547      PMCID: PMC196550          DOI: 10.1091/mbc.e03-02-0109

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  53 in total

Review 1.  Alternative pre-mRNA splicing: the logic of combinatorial control.

Authors:  C W Smith; J Valcárcel
Journal:  Trends Biochem Sci       Date:  2000-08       Impact factor: 13.807

2.  Ectopic expression of the Arabidopsis AtMYB23 gene induces differentiation of trichome cells.

Authors:  V Kirik; A Schnittger; V Radchuk; K Adler; M Hülskamp; H Bäumlein
Journal:  Dev Biol       Date:  2001-07-15       Impact factor: 3.582

Review 3.  The structure and function of proteins involved in mammalian pre-mRNA splicing.

Authors:  A Krämer
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

Review 4.  SR proteins and splicing control.

Authors:  J L Manley; R Tacke
Journal:  Genes Dev       Date:  1996-07-01       Impact factor: 11.361

5.  A novel family of plant splicing factors with a Zn knuckle motif: examination of RNA binding and splicing activities.

Authors:  S Lopato; R Gattoni; G Fabini; J Stevenin; A Barta
Journal:  Plant Mol Biol       Date:  1999-03       Impact factor: 4.076

6.  Characterization of a novel arginine/serine-rich splicing factor in Arabidopsis.

Authors:  S Lopato; E Waigmann; A Barta
Journal:  Plant Cell       Date:  1996-12       Impact factor: 11.277

7.  The concentration of B52, an essential splicing factor and regulator of splice site choice in vitro, is critical for Drosophila development.

Authors:  M E Kraus; J T Lis
Journal:  Mol Cell Biol       Date:  1994-08       Impact factor: 4.272

8.  Arabidopsis AUX1 gene: a permease-like regulator of root gravitropism.

Authors:  M J Bennett; A Marchant; H G Green; S T May; S P Ward; P A Millner; A R Walker; B Schulz; K A Feldmann
Journal:  Science       Date:  1996-08-16       Impact factor: 47.728

9.  Pre-mRNA splicing in plants: characterization of Ser/Arg splicing factors.

Authors:  S Lopato; A Mayeda; A R Krainer; A Barta
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-02       Impact factor: 11.205

10.  Identification of a plant serine-arginine-rich protein similar to the mammalian splicing factor SF2/ASF.

Authors:  G Lazar; T Schaal; T Maniatis; H M Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

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  49 in total

1.  Tissue-specific expression and dynamic organization of SR splicing factors in Arabidopsis.

Authors:  Yuda Fang; Stephen Hearn; David L Spector
Journal:  Mol Biol Cell       Date:  2004-03-19       Impact factor: 4.138

2.  The Arabidopsis SR45 Splicing Factor, a Negative Regulator of Sugar Signaling, Modulates SNF1-Related Protein Kinase 1 Stability.

Authors:  Raquel F Carvalho; Dóra Szakonyi; Craig G Simpson; Inês C R Barbosa; John W S Brown; Elena Baena-González; Paula Duque
Journal:  Plant Cell       Date:  2016-07-19       Impact factor: 11.277

3.  Systematic identification of factors involved in post-transcriptional processes in wheat grain.

Authors:  Sergiy Lopato; Ljudmilla Borisjuk; Andrew S Milligan; Neil Shirley; Natalia Bazanova; Kate Parsley; Peter Langridge
Journal:  Plant Mol Biol       Date:  2006-08-29       Impact factor: 4.076

Review 4.  Alternative splicing at the intersection of biological timing, development, and stress responses.

Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

5.  An interspecific plant hybrid shows novel changes in parental splice forms of genes for splicing factors.

Authors:  Moira Scascitelli; Marie Cognet; Keith L Adams
Journal:  Genetics       Date:  2010-01-25       Impact factor: 4.562

6.  Novel role for a serine/arginine-rich splicing factor, AdRSZ21 in plant defense and HR-like cell death.

Authors:  Koppolu Raja Rajesh Kumar; P B Kirti
Journal:  Plant Mol Biol       Date:  2012-09-02       Impact factor: 4.076

7.  High-Resolution Expression Map of the Arabidopsis Root Reveals Alternative Splicing and lincRNA Regulation.

Authors:  Song Li; Masashi Yamada; Xinwei Han; Uwe Ohler; Philip N Benfey
Journal:  Dev Cell       Date:  2016-11-10       Impact factor: 12.270

8.  Maize rough endosperm3 encodes an RNA splicing factor required for endosperm cell differentiation and has a nonautonomous effect on embryo development.

Authors:  Romain Fouquet; Federico Martin; Diego S Fajardo; Christine M Gault; Elisa Gómez; Chi-Wah Tseung; Tyler Policht; Gregorio Hueros; A Mark Settles
Journal:  Plant Cell       Date:  2011-12-02       Impact factor: 11.277

Review 9.  The multiple lives of NMD factors: balancing roles in gene and genome regulation.

Authors:  Olaf Isken; Lynne E Maquat
Journal:  Nat Rev Genet       Date:  2008-09       Impact factor: 53.242

10.  Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

Authors:  Jan C Schöning; Corinna Streitner; Irmtraud M Meyer; Yahong Gao; Dorothee Staiger
Journal:  Nucleic Acids Res       Date:  2008-11-04       Impact factor: 16.971

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