Literature DB >> 12960150

Release of ribosome-bound ribosome recycling factor by elongation factor G.

Michael C Kiel1, V Samuel Raj, Hideko Kaji, Akira Kaji.   

Abstract

Elongation factor G (EF-G) and ribosome recycling factor (RRF) disassemble post-termination complexes of ribosome, mRNA, and tRNA. RRF forms stable complexes with 70 S ribosomes and 50 S ribosomal subunits. Here, we show that EF-G releases RRF from 70 S ribosomal and model post-termination complexes but not from 50 S ribosomal subunit complexes. The release of bound RRF by EF-G is stimulated by GTP analogues. The EF-G-dependent release occurs in the presence of fusidic acid and viomycin. However, thiostrepton inhibits the release. RRF was shown to bind to EF-G-ribosome complexes in the presence of GTP with much weaker affinity, suggesting that EF-G may move RRF to this position during the release of RRF. On the other hand, RRF did not bind to EF-G-ribosome complexes with fusidic acid, suggesting that EF-G stabilized by fusidic acid does not represent the natural post-termination complex. In contrast, the complexes of ribosome, EF-G and thiostrepton could bind RRF, although with lower affinity. These results suggest that thiostrepton traps an intermediate complex having RRF on a position that clashes with the P/E site bound tRNA. Mutants of EF-G that are impaired for translocation fail to disassemble post-termination complexes and exhibit lower activity in releasing RRF. We propose that the release of ribosome-bound RRF by EF-G is required for post-termination complex disassembly. Before release from the ribosome, the position of RRF on the ribosome will change from the original A/P site to a new location that clashes with tRNA on the P/E site.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12960150     DOI: 10.1074/jbc.M304834200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  17 in total

1.  Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: functional implications.

Authors:  Rajendra K Agrawal; Manjuli R Sharma; Michael C Kiel; Go Hirokawa; Timothy M Booth; Christian M T Spahn; Robert A Grassucci; Akira Kaji; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-03       Impact factor: 11.205

2.  Structural insights into initial and intermediate steps of the ribosome-recycling process.

Authors:  Takeshi Yokoyama; Tanvir R Shaikh; Nobuhiro Iwakura; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  EMBO J       Date:  2012-03-02       Impact factor: 11.598

3.  X-ray crystallography study on ribosome recycling: the mechanism of binding and action of RRF on the 50S ribosomal subunit.

Authors:  Daniel N Wilson; Frank Schluenzen; Joerg M Harms; Takuya Yoshida; Tadayasu Ohkubo; Renate Albrecht; Joerg Buerger; Yuji Kobayashi; Paola Fucini
Journal:  EMBO J       Date:  2004-12-23       Impact factor: 11.598

Review 4.  Mechanism of recycling of post-termination ribosomal complexes in eubacteria: a new role of initiation factor 3.

Authors:  Anuradha Seshadri; Umesh Varshney
Journal:  J Biosci       Date:  2006-06       Impact factor: 1.826

Review 5.  Ribosome biogenesis and the translation process in Escherichia coli.

Authors:  Magdalena Kaczanowska; Monica Rydén-Aulin
Journal:  Microbiol Mol Biol Rev       Date:  2007-09       Impact factor: 11.056

6.  A Mutation in the 16S rRNA Decoding Region Attenuates the Virulence of Mycobacterium tuberculosis.

Authors:  Shinya Watanabe; Kazunori Matsumura; Hiroki Iwai; Keiji Funatogawa; Yuji Haishima; Chie Fukui; Kayo Okumura; Masako Kato-Miyazawa; Masahito Hashimoto; Kanae Teramoto; Fumiko Kirikae; Tohru Miyoshi-Akiyama; Teruo Kirikae
Journal:  Infect Immun       Date:  2016-07-21       Impact factor: 3.441

7.  The role of ribosome recycling factor in dissociation of 70S ribosomes into subunits.

Authors:  Go Hirokawa; Romana M Nijman; V Samuel Raj; Hideko Kaji; Kazuei Igarashi; Akira Kaji
Journal:  RNA       Date:  2005-08       Impact factor: 4.942

8.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

9.  A novel ketolide, RBx 14255, with activity against multidrug-resistant Streptococcus pneumoniae.

Authors:  V Samuel Raj; Tarani Kanta Barman; Vandana Kalia; Kedar Purnapatre; Smita Dube; Ramkumar G; Pragya Bhateja; Tarun Mathur; Tridib Chaira; Dilip J Upadhyay; Yogesh B Surase; R Venkataramanan; Anjan Chakrabarti; Biswajit Das; Pradip K Bhatnagar
Journal:  Antimicrob Agents Chemother       Date:  2014-02-18       Impact factor: 5.191

10.  Structural Insights into ribosome recycling factor interactions with the 70S ribosome.

Authors:  Raj D Pai; Wen Zhang; Barbara S Schuwirth; Go Hirokawa; Hideko Kaji; Akira Kaji; Jamie H D Cate
Journal:  J Mol Biol       Date:  2008-01-03       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.