Literature DB >> 12954197

Prediction of physicochemical properties based on neural network modelling.

Jyrki Taskinen1, Jouko Yliruusi.   

Abstract

The literature describing neural network modelling to predict physicochemical properties of organic compounds from the molecular structure is reviewed from the perspective of pharmaceutical research. The standard three-layer, feed-forward neural network is the technique most frequently used, although the use of other techniques is increasing. Various approaches to describe the molecular structure have been successfully used, including molecular fragments, topological indices, and descriptors calculated by semi-empirical quantum chemical methods. Some physicochemical properties, such as octanol-water partition coefficient, water solubility, boiling point and vapour pressure, have been modelled by several research groups over the years using different approaches and structurally diverse large training sets. The prediction accuracy of most models seems to be rather close to the performance of the experimental measurements, when the accuracy is assessed with a test set from the working database. Results with independent test sets have been less satisfactory. Implications of this problem are discussed.

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Year:  2003        PMID: 12954197     DOI: 10.1016/s0169-409x(03)00117-0

Source DB:  PubMed          Journal:  Adv Drug Deliv Rev        ISSN: 0169-409X            Impact factor:   15.470


  15 in total

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Journal:  AAPS J       Date:  2006-02-03       Impact factor: 4.009

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4.  Computer simulation of a novel pharmaceutical silicon nanocarrier.

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5.  Prediction of some important physical properties of sulfur compounds using quantitative structure-properties relationships.

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6.  QSPR modeling of detonation parameters and sensitivity of some energetic materials: DFT vs. PM3 calculations.

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Journal:  J Mol Model       Date:  2017-05-22       Impact factor: 1.810

7.  Effect of small-molecule modification on single-cell pharmacokinetics of PARP inhibitors.

Authors:  Greg M Thurber; Thomas Reiner; Katherine S Yang; Rainer H Kohler; Ralph Weissleder
Journal:  Mol Cancer Ther       Date:  2014-02-19       Impact factor: 6.261

8.  New public QSAR model for carcinogenicity.

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Review 9.  Hydrophobicity--shake flasks, protein folding and drug discovery.

Authors:  Aurijit Sarkar; Glen E Kellogg
Journal:  Curr Top Med Chem       Date:  2010       Impact factor: 3.295

10.  Learning to Make Chemical Predictions: the Interplay of Feature Representation, Data, and Machine Learning Methods.

Authors:  Mojtaba Haghighatlari; Jie Li; Farnaz Heidar-Zadeh; Yuchen Liu; Xingyi Guan; Teresa Head-Gordon
Journal:  Chem       Date:  2020-06-16       Impact factor: 22.804

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