Literature DB >> 23321705

Exploitation of interspecific diversity for monocot crop improvement.

J King1, I Armstead, J Harper, L Ramsey, J Snape, R Waugh, C James, A Thomas, D Gasior, R Kelly, L Roberts, P Gustafson, I King.   

Abstract

In many cultivated crop species there is limited genetic variation available for the development of new higher yielding varieties adapted to climate change and sustainable farming practises. The distant relatives of crop species provide a vast and largely untapped reservoir of genetic variation for a wide range of agronomically important traits that can be exploited by breeders for crop improvement. In this paper, in what we believe to be the largest introgression programme undertaken in the monocots, we describe the transfer of the entire genome of Festuca pratensis into Lolium perenne in overlapping chromosome segments. The L. perenne/F. pratensis introgressions were identified and characterised via 131 simple sequence repeats and 1612 SNPs anchored to the rice genome. Comparative analyses were undertaken to determine the syntenic relationship between L. perenne/F. pratensis and rice, wheat, barley, sorghum and Brachypodium distachyon. Analyses comparing recombination frequency and gene distribution indicated that a large proportion of the genes within the genome are located in the proximal regions of chromosomes which undergo low/very low frequencies of recombination. Thus, it is proposed that past breeding efforts to produce improved varieties have centred on the subset of genes located in the distal regions of chromosomes where recombination is highest. The use of alien introgression for crop improvement is important for meeting the challenges of global food supply and the monocots such as the forage grasses and cereals, together with recent technological advances in molecular biology, can help meet these challenges.

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Year:  2013        PMID: 23321705      PMCID: PMC3630809          DOI: 10.1038/hdy.2012.116

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  30 in total

1.  A linkage map of meadow fescue ( Festuca pratensis Huds.) and comparative mapping with other Poaceae species.

Authors:  V Alm; C Fang; C S Busso; K M Devos; K Vollan; Z Grieg; O A Rognli
Journal:  Theor Appl Genet       Date:  2003-08-16       Impact factor: 5.699

2.  Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution.

Authors:  Florent Murat; Jian-Hong Xu; Eric Tannier; Michael Abrouk; Nicolas Guilhot; Caroline Pont; Joachim Messing; Jérôme Salse
Journal:  Genome Res       Date:  2010-09-28       Impact factor: 9.043

3.  Dissecting the regulation of fructan metabolism in perennial ryegrass (Lolium perenne) with quantitative trait locus mapping.

Authors:  L B Turner; A J Cairns; I P Armstead; J Ashton; K Skøt; D Whittaker; M O Humphreys
Journal:  New Phytol       Date:  2006       Impact factor: 10.151

4.  From crop to model to crop: identifying the genetic basis of the staygreen mutation in the Lolium/Festuca forage and amenity grasses.

Authors:  Ian Armstead; Iain Donnison; Sylvain Aubry; John Harper; Stefan Hörtensteiner; Caron James; Jan Mani; Matt Moffet; Helen Ougham; Luned Roberts; Ann Thomas; Norman Weeden; Howard Thomas; Ian King
Journal:  New Phytol       Date:  2006       Impact factor: 10.151

5.  The physical relationship of barley chromosome 5 (1H) to the linkage groups of rice chromosomes 5 and 10.

Authors:  L Korzun; G Künzel
Journal:  Mol Gen Genet       Date:  1996-11-27

6.  Physical and genetic mapping in the grasses Lolium perenne and Festuca pratensis.

Authors:  J King; I P Armstead; I S Donnison; H M Thomas; R N Jones; M J Kearsey; L A Roberts; A Thomas; W G Morgan; I P King
Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

7.  Development of a genomic microsatellite library in perennial ryegrass (Lolium perenne) and its use in trait mapping.

Authors:  J King; D Thorogood; K J Edwards; I P Armstead; L Roberts; K Skøt; Z Hanley; I P King
Journal:  Ann Bot       Date:  2008-02-15       Impact factor: 4.357

8.  An integrated physical, genetic and cytogenetic map of Brachypodium distachyon, a model system for grass research.

Authors:  Melanie Febrer; Jose Luis Goicoechea; Jonathan Wright; Neil McKenzie; Xiang Song; Jinke Lin; Kristi Collura; Marina Wissotski; Yeisoo Yu; Jetty S S Ammiraju; Elzbieta Wolny; Dominika Idziak; Alexander Betekhtin; Dave Kudrna; Robert Hasterok; Rod A Wing; Michael W Bevan
Journal:  PLoS One       Date:  2010-10-18       Impact factor: 3.240

9.  Cross-species identification of Mendel's I locus.

Authors:  Ian Armstead; Iain Donnison; Sylvain Aubry; John Harper; Stefan Hörtensteiner; Caron James; Jan Mani; Matt Moffet; Helen Ougham; Luned Roberts; Ann Thomas; Norman Weeden; Howard Thomas; Ian King
Journal:  Science       Date:  2007-01-05       Impact factor: 47.728

10.  Rice pseudomolecule-anchored cross-species DNA sequence alignments indicate regional genomic variation in expressed sequence conservation.

Authors:  Ian Armstead; Lin Huang; Julie King; Helen Ougham; Howard Thomas; Ian King
Journal:  BMC Genomics       Date:  2007-08-20       Impact factor: 3.969

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  12 in total

Review 1.  Plant-Pathogen Warfare under Changing Climate Conditions.

Authors:  André C Velásquez; Christian Danve M Castroverde; Sheng Yang He
Journal:  Curr Biol       Date:  2018-05-21       Impact factor: 10.834

2.  Structural-functional dissection and characterization of yield-contributing traits originating from a group 7 chromosome of the wheatgrass species Thinopyrum ponticum after transfer into durum wheat.

Authors:  Ljiljana Kuzmanović; Andrea Gennaro; Stefano Benedettelli; Ian C Dodd; Stephen A Quarrie; Carla Ceoloni
Journal:  J Exp Bot       Date:  2013-12-06       Impact factor: 6.992

3.  Fluorescence chromosome banding and FISH mapping in perennial ryegrass, Lolium perenne L.

Authors:  Helal A Ansari; Nicholas W Ellison; Shalome A Bassett; Syed W Hussain; Gregory T Bryan; Warren M Williams
Journal:  BMC Genomics       Date:  2016-11-25       Impact factor: 3.969

4.  Efficient anchoring of alien chromosome segments introgressed into bread wheat by new Leymus racemosus genome-based markers.

Authors:  Offiong Ukpong Edet; June-Sik Kim; Masanori Okamoto; Kousuke Hanada; Tomoyuki Takeda; Masahiro Kishii; Yasir Serag Alnor Gorafi; Hisashi Tsujimoto
Journal:  BMC Genet       Date:  2018-03-27       Impact factor: 2.797

5.  Construction of Agropyron Gaertn. genetic linkage maps using a wheat 660K SNP array reveals a homoeologous relationship with the wheat genome.

Authors:  Shenghui Zhou; Jinpeng Zhang; Yonghe Che; Weihua Liu; Yuqing Lu; Xinming Yang; Xiuquan Li; Jizeng Jia; Xu Liu; Lihui Li
Journal:  Plant Biotechnol J       Date:  2017-10-16       Impact factor: 9.803

6.  An investigation of genotype-phenotype association in a festulolium forage grass population containing genome-spanning Festuca pratensis chromosome segments in a Lolium perenne background.

Authors:  John Harper; Dagmara Gasior; Ros Mathews; Ann Thomas; Caron Evans; Julie King; Ian King; Mike Humphreys; Ian Armstead
Journal:  PLoS One       Date:  2018-11-14       Impact factor: 3.240

7.  A DArT marker genetic map of perennial ryegrass (Lolium perenne L.) integrated with detailed comparative mapping information; comparison with existing DArT marker genetic maps of Lolium perenne, L. multiflorum and Festuca pratensis.

Authors:  Julie King; Ann Thomas; Caron James; Ian King; Ian Armstead
Journal:  BMC Genomics       Date:  2013-07-03       Impact factor: 3.969

8.  Chromatin state analysis of the barley epigenome reveals a higher-order structure defined by H3K27me1 and H3K27me3 abundance.

Authors:  Katie Baker; Taniya Dhillon; Isabelle Colas; Nicola Cook; Iain Milne; Linda Milne; Micha Bayer; Andrew J Flavell
Journal:  Plant J       Date:  2015-09-09       Impact factor: 6.417

9.  A step change in the transfer of interspecific variation into wheat from Amblyopyrum muticum.

Authors:  Julie King; Surbhi Grewal; Cai-Yun Yang; Stella Hubbart; Duncan Scholefield; Stephen Ashling; Keith J Edwards; Alexandra M Allen; Amanda Burridge; Claire Bloor; Alessandro Davassi; Glacy J da Silva; Ken Chalmers; Ian P King
Journal:  Plant Biotechnol J       Date:  2016-08-25       Impact factor: 9.803

10.  Karyotype reshufflings of Festuca pratensis × Lolium perenne hybrids.

Authors:  Joanna Majka; Zbigniew Zwierzykowski; Maciej Majka; Arkadiusz Kosmala
Journal:  Protoplasma       Date:  2017-09-07       Impact factor: 3.356

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