Literature DB >> 21212931

Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis.

Jan Bartoš1, Simen Rød Sandve, Roland Kölliker, David Kopecký, Pavla Christelová, Stěpán Stočes, Liv Ostrem, Arild Larsen, Andrzej Kilian, Odd-Arne Rognli, Jaroslav Doležel.   

Abstract

Species belonging to the Festuca-Lolium complex are important forage and turf species and as such, have been studied intensively. However, their out-crossing nature and limited availability of molecular markers make genetic studies difficult. Here, we report on saturation of F. pratensis and L. multiflorum genetic maps using Diversity Array Technology (DArT) markers and the DArTFest array.The 530 and 149 DArT markers were placed on genetic maps of L. multiflorum and F. pratensis, respectively, with overlap of 20 markers, which mapped in both species. The markers were sequenced and comparative sequence analysis was performed between L. multiflorum, rice and Brachypodium. The utility of the DArTFest array was then tested on a Festulolium population FuRs0357 in an integrated analysis using the DArT marker map positions to study associations between markers and freezing tolerance. Ninety six markers were significantly associated with freezing tolerance and five of these markers were genetically mapped to chromosomes 2, 4 and 7. Three genomic loci associated with freezing tolerance in the FuRs0357 population co-localized with chromosome segments and QTLs previously identified to be associated with freezing tolerance. The present work clearly confirms the potential of the DArTFest array in genetic studies of the Festuca-Lolium complex. The annotated DArTFest array resources could accelerate further studies and improvement of desired traits in Festuca-Lolium species.

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Year:  2011        PMID: 21212931     DOI: 10.1007/s00122-010-1518-z

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  31 in total

1.  A linkage map of meadow fescue ( Festuca pratensis Huds.) and comparative mapping with other Poaceae species.

Authors:  V Alm; C Fang; C S Busso; K M Devos; K Vollan; Z Grieg; O A Rognli
Journal:  Theor Appl Genet       Date:  2003-08-16       Impact factor: 5.699

2.  Phylogeny of the festucoid grasses of subtribe Loliinae and allies (Poeae, Pooideae) inferred from ITS and trnL-F sequences.

Authors:  Pilar Catalán; Pedro Torrecilla; Jose Angel López Rodríguez; Richard G Olmstead
Journal:  Mol Phylogenet Evol       Date:  2004-05       Impact factor: 4.286

3.  Genomic constitution of Festuca × Lolium hybrids revealed by the DArTFest array.

Authors:  David Kopecký; Jan Bartoš; Pavla Christelová; Vladimír Cernoch; Andrzej Kilian; Jaroslav Doležel
Journal:  Theor Appl Genet       Date:  2010-09-25       Impact factor: 5.699

4.  Genetic mapping reveals a single major QTL for bacterial wilt resistance in Italian ryegrass (Lolium multiflorum Lam.).

Authors:  Bruno Studer; Beat Boller; Doris Herrmann; Eva Bauer; Ulrich K Posselt; Franco Widmer; Roland Kölliker
Journal:  Theor Appl Genet       Date:  2006-06-24       Impact factor: 5.699

Review 5.  The 'inner circle' of the cereal genomes.

Authors:  Stéphanie Bolot; Michael Abrouk; Umar Masood-Quraishi; Nils Stein; Joachim Messing; Catherine Feuillet; Jérôme Salse
Journal:  Curr Opin Plant Biol       Date:  2008-12-16       Impact factor: 7.834

6.  GISH/FISH mapping of genes for freezing tolerance transferred from Festuca pratensis to Lolium multiflorum.

Authors:  A Kosmala; Z Zwierzykowski; D Gasior; M Rapacz; E Zwierzykowska; M W Humphreys
Journal:  Heredity (Edinb)       Date:  2006-03       Impact factor: 3.821

7.  Gene expression and genetic mapping analyses of a perennial ryegrass glycine-rich RNA-binding protein gene suggest a role in cold adaptation.

Authors:  H Shinozuka; H Hisano; S Yoneyama; Y Shimamoto; E S Jones; J W Forster; T Yamada; A Kanazawa
Journal:  Mol Genet Genomics       Date:  2006-01-28       Impact factor: 3.291

8.  A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits.

Authors:  Peter Wenzl; Haobing Li; Jason Carling; Meixue Zhou; Harsh Raman; Edie Paul; Phillippa Hearnden; Christina Maier; Ling Xia; Vanessa Caig; Jaroslava Ovesná; Mehmet Cakir; David Poulsen; Junping Wang; Rosy Raman; Kevin P Smith; Gary J Muehlbauer; Ken J Chalmers; Andris Kleinhofs; Eric Huttner; Andrzej Kilian
Journal:  BMC Genomics       Date:  2006-08-12       Impact factor: 3.969

9.  DArT markers for the rye genome - genetic diversity and mapping.

Authors:  Hanna Bolibok-Bragoszewska; Katarzyna Heller-Uszyńska; Peter Wenzl; Grzegorz Uszyński; Andrzej Kilian; Monika Rakoczy-Trojanowska
Journal:  BMC Genomics       Date:  2009-12-03       Impact factor: 3.969

10.  Development and mapping of DArT markers within the Festuca - Lolium complex.

Authors:  David Kopecký; Jan Bartos; Adam J Lukaszewski; James H Baird; Vladimír Cernoch; Roland Kölliker; Odd Arne Rognli; Helene Blois; Vanessa Caig; Thomas Lübberstedt; Bruno Studer; Paul Shaw; Jaroslav Dolezel; Andrzej Kilian
Journal:  BMC Genomics       Date:  2009-10-15       Impact factor: 3.969

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  7 in total

1.  Development of wild barley (Hordeum chilense)-derived DArT markers and their use into genetic and physical mapping.

Authors:  C Rodríguez-Suárez; M J Giménez; N Gutiérrez; C M Avila; A Machado; E Huttner; M C Ramírez; A C Martín; A Castillo; A Kilian; A Martín; S G Atienza
Journal:  Theor Appl Genet       Date:  2011-11-03       Impact factor: 5.699

2.  Flow sorting and sequencing meadow fescue chromosome 4F.

Authors:  David Kopecký; Mihaela Martis; Jarmila Číhalíková; Eva Hřibová; Jan Vrána; Jan Bartoš; Jitka Kopecká; Federica Cattonaro; Štěpán Stočes; Petr Novák; Pavel Neumann; Jiří Macas; Hana Šimková; Bruno Studer; Torben Asp; James H Baird; Petr Navrátil; Miroslava Karafiátová; Marie Kubaláková; Jan Šafář; Klaus Mayer; Jaroslav Doležel
Journal:  Plant Physiol       Date:  2013-10-04       Impact factor: 8.340

3.  An ultra-high density genetic linkage map of perennial ryegrass (Lolium perenne) using genotyping by sequencing (GBS) based on a reference shotgun genome assembly.

Authors:  Janaki Velmurugan; Ewan Mollison; Susanne Barth; David Marshall; Linda Milne; Christopher J Creevey; Bridget Lynch; Helena Meally; Matthew McCabe; Dan Milbourne
Journal:  Ann Bot       Date:  2016-06-06       Impact factor: 4.357

4.  Chlorophyll a Fluorescence and Freezing Tests as Selection Methods for Growth Cessation and Increased Winter Survival in ×Festulolium.

Authors:  Liv Østrem; Marcin Rapacz; Arild Larsen; Petter Marum; Odd A Rognli
Journal:  Front Plant Sci       Date:  2018-08-20       Impact factor: 5.753

5.  Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.

Authors:  César D Petroli; Carolina P Sansaloni; Jason Carling; Dorothy A Steane; René E Vaillancourt; Alexander A Myburg; Orzenil Bonfim da Silva; Georgios Joannis Pappas; Andrzej Kilian; Dario Grattapaglia
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

6.  A DArT marker genetic map of perennial ryegrass (Lolium perenne L.) integrated with detailed comparative mapping information; comparison with existing DArT marker genetic maps of Lolium perenne, L. multiflorum and Festuca pratensis.

Authors:  Julie King; Ann Thomas; Caron James; Ian King; Ian Armstead
Journal:  BMC Genomics       Date:  2013-07-03       Impact factor: 3.969

7.  B chromosomes are associated with redistribution of genetic recombination towards lower recombination chromosomal regions in perennial ryegrass.

Authors:  John Harper; Dylan Phillips; Ann Thomas; Dagmara Gasior; Caron Evans; Wayne Powell; Julie King; Ian King; Glyn Jenkins; Ian Armstead
Journal:  J Exp Bot       Date:  2018-04-09       Impact factor: 6.992

  7 in total

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