Literature DB >> 12917347

The critical cis-acting element required for IMD2 feedback regulation by GDP is a TATA box located 202 nucleotides upstream of the transcription start site.

Mafalda Escobar-Henriques1, Bertrand Daignan-Fornier, Martine A Collart.   

Abstract

Guanylic nucleotides are essential cellular players, and the critical enzyme in their tightly regulated synthesis in Saccharomyces cerevisiae is encoded by the IMD2 gene. The transcription of IMD2 is subject to general repression by nutrient limitation through the cis nutrient-sensing element. It is also subject to specific feedback regulation by the end products of the guanylic nucleotide synthesis pathway. The critical cis element for this latter mechanism is the guanine response element (GRE), a TATAATA sequence which is located 202 nucleotides upstream of the transcription initiation site and which functions as the IMD2 TATA box. We show that the GRE functions in conjunction with a 52-nucleotide stretch near the transcription start site. This very unusual promoter structure ensures low, basal expression of IMD2 and the recruitment of TFIID to the GRE in response to guanylic nucleotide limitation.

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Year:  2003        PMID: 12917347      PMCID: PMC180940          DOI: 10.1128/MCB.23.17.6267-6278.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  34 in total

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3.  Transcription initiation of the yeast IMD2 gene is abolished in response to nutrient limitation through a sequence in its coding region.

Authors:  Mafalda Escobar-Henriques; Martine A Collart; Bertrand Daignan-Fornier
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

4.  Family of proteins that interact with TFIID and regulate promoter activity.

Authors:  M Meisterernst; R G Roeder
Journal:  Cell       Date:  1991-11-01       Impact factor: 41.582

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Authors:  A M Myers; A Tzagoloff; D M Kinney; C J Lusty
Journal:  Gene       Date:  1986       Impact factor: 3.688

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Journal:  Mol Cell Biol       Date:  1990-09       Impact factor: 4.272

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Journal:  J Biol Chem       Date:  2002-05-16       Impact factor: 5.157

8.  Transcriptional regulation of the yeast gmp synthesis pathway by its end products.

Authors:  M Escobar-Henriques; B Daignan-Fornier
Journal:  J Biol Chem       Date:  2001-01-12       Impact factor: 5.157

9.  The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions.

Authors:  Cécile Deluen; Nicole James; Laurent Maillet; Miguel Molinete; Grégory Theiler; Marc Lemaire; Nicole Paquet; Martine A Collart
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

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Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  9 in total

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Authors:  Per O Ljungdahl; Bertrand Daignan-Fornier
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3.  Metabolic regulation of IMD2 transcription and an unusual DNA element that generates short transcripts.

Authors:  Katarzyna A Kopcewicz; Thomas W O'Rourke; Daniel Reines
Journal:  Mol Cell Biol       Date:  2007-02-12       Impact factor: 4.272

4.  Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae.

Authors:  Carrie Anne Davis; Manuel Ares
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-16       Impact factor: 11.205

5.  Properties of an intergenic terminator and start site switch that regulate IMD2 transcription in yeast.

Authors:  M Harley Jenks; Thomas W O'Rourke; Daniel Reines
Journal:  Mol Cell Biol       Date:  2008-04-21       Impact factor: 4.272

6.  Functions of Saccharomyces cerevisiae TFIIF during transcription start site utilization.

Authors:  Denys A Khaperskyy; Michelle L Ammerman; Robert C Majovski; Alfred S Ponticelli
Journal:  Mol Cell Biol       Date:  2008-03-24       Impact factor: 4.272

7.  Lethal accumulation of guanylic nucleotides in Saccharomyces cerevisiae HPT1-deregulated mutants.

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Journal:  Genetics       Date:  2008-02-03       Impact factor: 4.562

8.  Mapping of transcription start sites in Saccharomyces cerevisiae using 5' SAGE.

Authors:  Zhihong Zhang; Fred S Dietrich
Journal:  Nucleic Acids Res       Date:  2005-05-19       Impact factor: 16.971

9.  Mutations of RNA polymerase II activate key genes of the nucleoside triphosphate biosynthetic pathways.

Authors:  Marta Kwapisz; Maxime Wery; Daphné Després; Yad Ghavi-Helm; Julie Soutourina; Pierre Thuriaux; François Lacroute
Journal:  EMBO J       Date:  2008-08-21       Impact factor: 11.598

  9 in total

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