Literature DB >> 2201891

Tc, an unusual promoter element required for constitutive transcription of the yeast HIS3 gene.

S Mahadevan1, K Struhl.   

Abstract

Tc is the proximal promoter element required for constitutive his3 transcription that occurs in the absence of the canonical TATA element (TR) and is initiated from the +1 site. The TC element, unlike TR, does not respond to transcriptional stimulation by the GCN4 or GAL4 activator protein. Analysis of deletion, substitution, and point mutations indicates that Tc mapped between nucleotides -54 and -83 and is a sequence-dependent element because it could not be functionally replaced by other DNA sequences. However, in contrast to the behavior of typical promoter elements, it was surprisingly difficult to eliminate Tc function by base pair substitutions. Of 15 derivatives averaging four substitutions in the Tc region and representing 40% of all possible single changes, only 1 inactivated the Tc element. Moreover, the phenotypes of mutant and hybrid elements indicated that inactivation of Tc required multiple changes. The spacing between Tc and the initiation region could be varied over a 30-base-pair range without significantly affecting the level of transcription from the +1 site. From these results, we consider it possible that Tc may not interact with TFIID or some other typical sequence-specific transcription factor, but instead might influence transcription, either directly or indirectly, by its DNA structure.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2201891      PMCID: PMC361030          DOI: 10.1128/mcb.10.9.4447-4455.1990

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  27 in total

1.  Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitro.

Authors:  C R Wobbe; K Struhl
Journal:  Mol Cell Biol       Date:  1990-08       Impact factor: 4.272

2.  Transcription of the his3 gene region in Saccharomyces cerevisiae.

Authors:  K Struhl; R W Davis
Journal:  J Mol Biol       Date:  1981-11-05       Impact factor: 5.469

3.  The yeast his3 promoter contains at least two distinct elements.

Authors:  K Struhl
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

4.  Constitutive and coordinately regulated transcription of yeast genes: promoter elements, positive and negative regulatory sites, and DNA binding proteins.

Authors:  K Struhl; W Chen; D E Hill; I A Hope; M A Oettinger
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1985

5.  Nucleotide sequence and transcriptional mapping of the yeast pet56-his3-ded1 gene region.

Authors:  K Struhl
Journal:  Nucleic Acids Res       Date:  1985-12-09       Impact factor: 16.971

6.  GCN4 protein, synthesized in vitro, binds HIS3 regulatory sequences: implications for general control of amino acid biosynthetic genes in yeast.

Authors:  I A Hope; K Struhl
Journal:  Cell       Date:  1985-11       Impact factor: 41.582

7.  Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast.

Authors:  K Struhl
Journal:  Proc Natl Acad Sci U S A       Date:  1985-12       Impact factor: 11.205

8.  Genetic properties and chromatin structure of the yeast gal regulatory element: an enhancer-like sequence.

Authors:  K Struhl
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

9.  Nucleosome reconstitution on plasmid-inserted poly(dA) . poly(dT).

Authors:  A Prunell
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

10.  Yeast mRNA initiation sites are determined primarily by specific sequences, not by the distance from the TATA element.

Authors:  W Chen; K Struhl
Journal:  EMBO J       Date:  1985-12-01       Impact factor: 11.598

View more
  22 in total

1.  Gene dosage as a possible major determinant for equal expression levels of genes encoding RNA polymerase subunits in the hypotrichous ciliate Euplotes octocarinatus.

Authors:  J Kaufmann; A Klein
Journal:  Nucleic Acids Res       Date:  1992-09-11       Impact factor: 16.971

2.  Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.

Authors:  Hui Wang; Masahiro Morita; Xiuna Yang; Toru Suzuki; Wen Yang; Jiao Wang; Kentaro Ito; Quan Wang; Cong Zhao; Mark Bartlam; Tadashi Yamamoto; Zihe Rao
Journal:  EMBO J       Date:  2010-07-13       Impact factor: 11.598

Review 3.  The structural basis for deadenylation by the CCR4-NOT complex.

Authors:  Mark Bartlam; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2010-06-04       Impact factor: 14.870

4.  Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits.

Authors:  T K Albert; M Lemaire; N L van Berkum; R Gentz; M A Collart; H T Timmers
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

5.  Association of transcription factor IIA with TATA binding protein is required for transcriptional activation of a subset of promoters and cell cycle progression in Saccharomyces cerevisiae.

Authors:  J Ozer; L E Lezina; J Ewing; S Audi; P M Lieberman
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

6.  Association of distinct yeast Not2 functional domains with components of Gcn5 histone acetylase and Ccr4 transcriptional regulatory complexes.

Authors:  J D Benson; M Benson; P M Howley; K Struhl
Journal:  EMBO J       Date:  1998-11-16       Impact factor: 11.598

7.  Nucleosome loss activates CUP1 and HIS3 promoters to fully induced levels in the yeast Saccharomyces cerevisiae.

Authors:  L K Durrin; R K Mann; M Grunstein
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

8.  The critical cis-acting element required for IMD2 feedback regulation by GDP is a TATA box located 202 nucleotides upstream of the transcription start site.

Authors:  Mafalda Escobar-Henriques; Bertrand Daignan-Fornier; Martine A Collart
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

9.  Promoter elements determining weak expression of the GAL4 regulatory gene of Saccharomyces cerevisiae.

Authors:  D W Griggs; M Johnston
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

10.  Sequence features of yeast and human core promoters that are predictive of maximal promoter activity.

Authors:  Shai Lubliner; Leeat Keren; Eran Segal
Journal:  Nucleic Acids Res       Date:  2013-04-17       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.