Literature DB >> 11441018

Regulation of an IMP dehydrogenase gene and its overexpression in drug-sensitive transcription elongation mutants of yeast.

R J Shaw1, J L Wilson, K T Smith, D Reines.   

Abstract

IMP dehydrogenase is a rate-limiting enzyme involved in the synthesis of GTP. In mammalian cells it is regulated with respect to growth rate and is the target of numerous therapeutic agents. Mutations in the RNA polymerase II elongation machinery render yeast sensitive to inhibitors of IMP dehydrogenase and defective in inducing transcription of one of the IMP dehydrogenase-encoding genes, IMD2. Here we show that loss of IMD2, but not IMD1, IMD3, or IMD4, conferred upon yeast the same drug sensitivity found in elongation mutants. We tested whether the drug sensitivity of elongation mutants is due to their inability to induce IMD2 by providing them with exogenous copies of the gene. In some elongation mutants, overexpression reversed drug sensitivity and a transcriptional defect. Overexpression in mutants with a more severe phenotype partially suppressed drug sensitivity but was inconsequential in reversing a defect in transcription. These findings suggest that the drug sensitivity of elongation mutants is largely but not solely attributable to defects in the ability to induce IMD2, because transcription is compromised even when IMD2 mRNA levels are adequate. We describe two DNA sequence elements in the promoter of the gene that regulate it. We also found that IMD2 mRNA abundance is coupled to cell growth rate. These findings show that yeast possess a conserved system that gauges nucleotide pools and cell growth rate and responds through a uniquely regulated member of the IMD gene family.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11441018      PMCID: PMC3371605          DOI: 10.1074/jbc.M105075200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  44 in total

1.  Transcription elongation factor S-II confers yeast resistance to 6-azauracil by enhancing expression of the SSM1 gene.

Authors:  M Shimoaraiso; T Nakanishi; T Kubo; S Natori
Journal:  J Biol Chem       Date:  2000-09-22       Impact factor: 5.157

2.  RNA polymerase II subunit Rpb9 regulates transcription elongation in vivo.

Authors:  S A Hemming; D B Jansma; P F Macgregor; A Goryachev; J D Friesen; A M Edwards
Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

3.  Analysis of gene induction and arrest site transcription in yeast with mutations in the transcription elongation machinery.

Authors:  M Wind-Rotolo; D Reines
Journal:  J Biol Chem       Date:  2001-01-19       Impact factor: 5.157

4.  IMP dehydrogenase, an enzyme linked with proliferation and malignancy.

Authors:  R C Jackson; G Weber; H P Morris
Journal:  Nature       Date:  1975-07-24       Impact factor: 49.962

5.  Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis.

Authors:  M Nonet; C Scafe; J Sexton; R Young
Journal:  Mol Cell Biol       Date:  1987-05       Impact factor: 4.272

6.  Genetic interactions between TFIIS and the Swi-Snf chromatin-remodeling complex.

Authors:  J K Davie; C M Kane
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

7.  Yeast GMP kinase mutants constitutively express AMP biosynthesis genes by phenocopying a hypoxanthine-guanine phosphoribosyltransferase defect.

Authors:  K Lecoq; M Konrad; B Daignan-Fornier
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

8.  Synthetic lethal interactions suggest a role for the Saccharomyces cerevisiae Rtf1 protein in transcription elongation.

Authors:  P J Costa; K M Arndt
Journal:  Genetics       Date:  2000-10       Impact factor: 4.562

9.  Transcriptional regulation of the yeast gmp synthesis pathway by its end products.

Authors:  M Escobar-Henriques; B Daignan-Fornier
Journal:  J Biol Chem       Date:  2001-01-12       Impact factor: 5.157

10.  A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.

Authors:  R S Sikorski; P Hieter
Journal:  Genetics       Date:  1989-05       Impact factor: 4.562

View more
  38 in total

1.  Inosine 5'-monophosphate dehydrogenase binds nucleic acids in vitro and in vivo.

Authors:  Jeremy E McLean; Nobuko Hamaguchi; Peter Belenky; Sarah E Mortimer; Martin Stanton; Lizbeth Hedstrom
Journal:  Biochem J       Date:  2004-04-15       Impact factor: 3.857

2.  Use of RNA yeast polymerase II mutants in studying transcription elongation.

Authors:  Daniel Reines
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

3.  Transcription initiation of the yeast IMD2 gene is abolished in response to nutrient limitation through a sequence in its coding region.

Authors:  Mafalda Escobar-Henriques; Martine A Collart; Bertrand Daignan-Fornier
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

4.  The conserved foot domain of RNA pol II associates with proteins involved in transcriptional initiation and/or early elongation.

Authors:  M Carmen García-López; Vicent Pelechano; M Carmen Mirón-García; Ana I Garrido-Godino; Alicia García; Olga Calvo; Michel Werner; José E Pérez-Ortín; Francisco Navarro
Journal:  Genetics       Date:  2011-09-27       Impact factor: 4.562

5.  Yeast Pol II start-site selection: the long and the short of it.

Authors:  Jeffry L Corden
Journal:  EMBO Rep       Date:  2008-10-10       Impact factor: 8.807

6.  Bur1 kinase is required for efficient transcription elongation by RNA polymerase II.

Authors:  Michael-Christopher Keogh; Vladimir Podolny; Stephen Buratowski
Journal:  Mol Cell Biol       Date:  2003-10       Impact factor: 4.272

7.  Analysis of the interaction between piD261/Bud32, an evolutionarily conserved protein kinase of Saccharomyces cerevisiae, and the Grx4 glutaredoxin.

Authors:  Raffaele Lopreiato; Sonia Facchin; Geppo Sartori; Giorgio Arrigoni; Stefano Casonato; Maria Ruzzene; Lorenzo A Pinna; Giovanna Carignani
Journal:  Biochem J       Date:  2004-01-15       Impact factor: 3.857

8.  Balanced production of ribosome components is required for proper G1/S transition in Saccharomyces cerevisiae.

Authors:  Fernando Gómez-Herreros; Olga Rodríguez-Galán; Macarena Morillo-Huesca; Douglas Maya; María Arista-Romero; Jesús de la Cruz; Sebastián Chávez; Mari Cruz Muñoz-Centeno
Journal:  J Biol Chem       Date:  2013-09-16       Impact factor: 5.157

9.  Detection of the mycophenolate-inhibited form of IMP dehydrogenase in vivo.

Authors:  Christine C McPhillips; Judith W Hyle; Daniel Reines
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-03       Impact factor: 11.205

10.  The Ras/PKA signaling pathway may control RNA polymerase II elongation via the Spt4p/Spt5p complex in Saccharomyces cerevisiae.

Authors:  Susie C Howard; Arelis Hester; Paul K Herman
Journal:  Genetics       Date:  2003-11       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.