Literature DB >> 12910388

A novel lineage of sulfate-reducing microorganisms: Thermodesulfobiaceae fam. nov., Thermodesulfobium narugense, gen. nov., sp. nov., a new thermophilic isolate from a hot spring.

Koji Mori1, Hongik Kim, Takeshi Kakegawa, Satoshi Hanada.   

Abstract

A novel type of a sulfate-reducing microorganism, represented by strain Na82T, was isolated from a hot spring in Narugo, Japan. The isolate was a moderate thermophilic autotroph that was able to grow on H2/CO2 by sulfate respiration. The isolate could grow with nitrate in place of sulfate, and possessed menaquinone-7 and menaquinone-7(H2) as respiratory quinones. Phylogenetic analysis of the 16S rRNA gene sequence indicated that strain Na82T was a member of the domain Bacteria and distant from any known bacteria, as well as from other sulfate-reducing bacteria (sequence similarities less than 80%). The phylogenetic analysis of the dsrAB gene (alpha and beta subunits of dissimilatory sulfite reductase) sequence also suggested that strain Na82T was not closely related to other sulfate reducers. On the basis of the phenotypic and phylogenetic data, a new taxon is established for the isolate. We proposed the name Thermodesulfobium narugense gen. nov., sp. nov. with strain Na82T (=DSM 14796T=JCM 11510T) as the type strain. Furthermore, a new family, Thermodesulfobiaceae fam. nov., is proposed for the genus.

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Year:  2003        PMID: 12910388     DOI: 10.1007/s00792-003-0320-0

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  31 in total

1.  Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes.

Authors:  D Minz; J L Flax; S J Green; G Muyzer; Y Cohen; M Wagner; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

2.  Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine arctic sediments.

Authors:  K Ravenschlag; K Sahm; C Knoblauch; B B Jørgensen; R Amann
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

3.  Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes.

Authors:  M Klein; M Friedrich; A J Roger; P Hugenholtz; S Fishbain; H Abicht; L L Blackall; D A Stahl; M Wagner
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

4.  Thermacetogenium phaeum gen. nov., sp. nov., a strictly anaerobic, thermophilic, syntrophic acetate-oxidizing bacterium.

Authors:  S Hattori; Y Kamagata; S Hanada; H Shoun
Journal:  Int J Syst Evol Microbiol       Date:  2000-07       Impact factor: 2.747

5.  Isolation of extremely thermophilic sulfate reducers: evidence for a novel branch of archaebacteria.

Authors:  K O Stetter; G Lauerer; M Thomm; A Neuner
Journal:  Science       Date:  1987-05-15       Impact factor: 47.728

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Determination of the gram type using the reaction between polymyxin B and lipopolysaccharides of the outer cell wall of whole bacteria.

Authors:  J Wiegel; L Quandt
Journal:  J Gen Microbiol       Date:  1982-10

8.  Caldivirga maquilingensis gen. nov., sp. nov., a new genus of rod-shaped crenarchaeote isolated from a hot spring in the Philippines.

Authors:  T Itoh; K Suzuki; P C Sanchez; T Nakase
Journal:  Int J Syst Bacteriol       Date:  1999-07

9.  Desulfacinum hydrothermale sp. nov., a thermophilic, sulfate-reducing bacterium from geothermally heated sediments near Milos Island (Greece).

Authors:  S M Sievert; J Kuever
Journal:  Int J Syst Evol Microbiol       Date:  2000-05       Impact factor: 2.747

10.  Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana.

Authors:  M T Cottrell; S C Cary
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

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  30 in total

1.  Lateral gene transfer of dissimilatory (bi)sulfite reductase revisited.

Authors:  Vladimir Zverlov; Michael Klein; Sebastian Lücker; Michael W Friedrich; Josef Kellermann; David A Stahl; Alexander Loy; Michael Wagner
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

2.  Phylogenetic diversity and distribution of dissimilatory sulfite reductase genes from deep-sea sediment cores.

Authors:  Ryo Kaneko; Toru Hayashi; Manabu Tanahashi; Takeshi Naganuma
Journal:  Mar Biotechnol (NY)       Date:  2007-05-12       Impact factor: 3.619

3.  First cultivation and ecological investigation of a bacterium affiliated with the candidate phylum OP5 from hot springs.

Authors:  Koji Mori; Michinari Sunamura; Katsunori Yanagawa; Jun-ichiro Ishibashi; Youko Miyoshi; Takao Iino; Ken-Ichiro Suzuki; Tetsuro Urabe
Journal:  Appl Environ Microbiol       Date:  2008-09-05       Impact factor: 4.792

4.  Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using aprA as functional marker gene.

Authors:  Birte Meyer; Jan Kuever
Journal:  Appl Environ Microbiol       Date:  2007-10-05       Impact factor: 4.792

5.  Comparative genomic analysis of phylogenetically closely related Hydrogenobaculum sp. isolates from Yellowstone National Park.

Authors:  Christine Romano; Seth D'Imperio; Tanja Woyke; Konstantinos Mavromatis; Roger Lasken; Everett L Shock; Timothy R McDermott
Journal:  Appl Environ Microbiol       Date:  2013-02-22       Impact factor: 4.792

6.  Microbial diversity in anaerobic sediments at Rio Tinto, a naturally acidic environment with a high heavy metal content.

Authors:  Irene Sánchez-Andrea; Nuria Rodríguez; Ricardo Amils; José Luis Sanz
Journal:  Appl Environ Microbiol       Date:  2011-07-01       Impact factor: 4.792

7.  Ferredoxin:thioredoxin reductase (FTR) links the regulation of oxygenic photosynthesis to deeply rooted bacteria.

Authors:  Monica Balsera; Estefania Uberegui; Dwi Susanti; Ruth A Schmitz; Biswarup Mukhopadhyay; Peter Schürmann; Bob B Buchanan
Journal:  Planta       Date:  2012-12-06       Impact factor: 4.116

Review 8.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

9.  Carbon source preference in chemosynthetic hot spring communities.

Authors:  Matthew R Urschel; Michael D Kubo; Tori M Hoehler; John W Peters; Eric S Boyd
Journal:  Appl Environ Microbiol       Date:  2015-03-27       Impact factor: 4.792

10.  Sorting out the mix in microbial genomics.

Authors:  Michael Y Galperin
Journal:  Environ Microbiol       Date:  2008-12       Impact factor: 5.491

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