Literature DB >> 12910259

An alcohol dehydrogenase ribozyme.

Shinya Tsukiji1, Swetansu B Pattnaik, Hiroaki Suga.   

Abstract

We report an RNA molecule that exhibits activity analogous to that of alcohol dehydrogenase (ADH). Directed in vitro evolution was used to enrich nicotinamide adenine dinucleotide (NAD+)-dependent redox-active RNAs from a combinatorial pool. The most active ribozyme in the population forms a compact pseudoknotted structure and oxidizes an alcohol seven orders of magnitude faster than the estimated spontaneous rate. Moreover, this ADH RNA was coupled with a redox relay between NADH and flavin adenine dinucleotide to give a NAD+-regeneration system. Our demonstration of the redox ability of RNA adds support to an RNA-based metabolic system in ancient life.

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Year:  2003        PMID: 12910259     DOI: 10.1038/nsb964

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  27 in total

1.  Use of a coenzyme by the glmS ribozyme-riboswitch suggests primordial expansion of RNA chemistry by small molecules.

Authors:  Adrian R Ferré-D'Amaré
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

2.  Selection and evolution of NTP-specific aptamers.

Authors:  Laure Weill; Dominique Louis; Bruno Sargueil
Journal:  Nucleic Acids Res       Date:  2004-09-27       Impact factor: 16.971

Review 3.  Getting past the RNA world: the initial Darwinian ancestor.

Authors:  Michael Yarus
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-04-01       Impact factor: 10.005

Review 4.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

5.  Prebiotic chemistry: Ribozyme takes its vitamins.

Authors:  Cynthia J Burrows
Journal:  Nat Chem       Date:  2013-11       Impact factor: 24.427

6.  The chemical versatility of RNA.

Authors:  David A Hiller; Scott A Strobel
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

7.  The block spectrum of RNA pseudoknot structures.

Authors:  Thomas J X Li; Christie S Burris; Christian M Reidys
Journal:  J Math Biol       Date:  2019-06-06       Impact factor: 2.259

8.  Statistics of topological RNA structures.

Authors:  Thomas J X Li; Christian M Reidys
Journal:  J Math Biol       Date:  2016-11-16       Impact factor: 2.259

Review 9.  Functional nucleic acid-based hydrogels for bioanalytical and biomedical applications.

Authors:  Juan Li; Liuting Mo; Chun-Hua Lu; Ting Fu; Huang-Hao Yang; Weihong Tan
Journal:  Chem Soc Rev       Date:  2016-03-07       Impact factor: 54.564

10.  A thiamin-utilizing ribozyme decarboxylates a pyruvate-like substrate.

Authors:  Paul Cernak; Dipankar Sen
Journal:  Nat Chem       Date:  2013-10-13       Impact factor: 24.427

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