Literature DB >> 12842870

NMR study on the structural changes of cytochrome P450cam upon the complex formation with putidaredoxin. Functional significance of the putidaredoxin-induced structural changes.

Takehiko Tosha1, Shiro Yoshioka, Satoshi Takahashi, Koichiro Ishimori, Hideo Shimada, Isao Morishima.   

Abstract

We investigated putidaredoxin-induced structural changes in carbonmonoxy P450cam by using NMR spectroscopy. The resonance from the beta-proton of the axial cysteine was upfield shifted by 0.12 ppm upon the putidaredoxin binding, indicating that the axial cysteine approaches to the heme-iron by about 0.1 A. The approach of the axial cysteine to the heme-iron would enhance the electronic donation from the axial thiolate to the heme-iron, resulting in the enhanced heterolysis of the dioxygen bond. In addition to the structural perturbation on the axial ligand, the structural changes in the substrate and ligand binding site were observed. The resonances from the 5-exo- and 9-methyl-protons of d-camphor, which were newly identified in this study, were upfield shifted by 1.28 and 0.20 ppm, respectively, implying that d-camphor moves to the heme-iron by 0.15-0.7 A. Based on the radical rebound mechanism, the approach of d-camphor to the heme-iron could promote the oxygen transfer reaction. On the other hand, the downfield shift of the resonance from the gamma-methyl group of Thr-252 reflects the movement of the side chain away from the heme-iron by approximately 0.25 A. Because Thr-252 regulates the heterolysis of the dioxygen bond, the positional rearrangement of Thr-252 might assist the scission of the dioxygen bond. We, therefore, conclude that putidaredoxin induces the specific heme environmental changes of P450cam, which would facilitate the oxygen activation and the oxygen transfer reaction.

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Year:  2003        PMID: 12842870     DOI: 10.1074/jbc.M304265200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  15 in total

Review 1.  Conformational plasticity and structure/function relationships in cytochromes P450.

Authors:  Thomas C Pochapsky; Sophia Kazanis; Marina Dang
Journal:  Antioxid Redox Signal       Date:  2010-10       Impact factor: 8.401

2.  P450cam visits an open conformation in the absence of substrate.

Authors:  Young-Tae Lee; Richard F Wilson; Igor Rupniewski; David B Goodin
Journal:  Biochemistry       Date:  2010-04-27       Impact factor: 3.162

Review 3.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

4.  Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate.

Authors:  Stefan Stoll; Young-Tae Lee; Mo Zhang; Richard F Wilson; R David Britt; David B Goodin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-23       Impact factor: 11.205

Review 5.  Heme enzyme structure and function.

Authors:  Thomas L Poulos
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

Review 6.  Structural biology of redox partner interactions in P450cam monooxygenase: a fresh look at an old system.

Authors:  Irina F Sevrioukova; Thomas L Poulos
Journal:  Arch Biochem Biophys       Date:  2010-09-15       Impact factor: 4.013

7.  Detection of a high-barrier conformational change in the active site of cytochrome P450cam upon binding of putidaredoxin.

Authors:  Julie Y Wei; Thomas C Pochapsky; Susan Sondej Pochapsky
Journal:  J Am Chem Soc       Date:  2005-05-18       Impact factor: 15.419

8.  The conformation of P450cam in complex with putidaredoxin is dependent on oxidation state.

Authors:  William K Myers; Young-Tae Lee; R David Britt; David B Goodin
Journal:  J Am Chem Soc       Date:  2013-08-05       Impact factor: 15.419

9.  Comparison of the complexes formed by cytochrome P450cam with cytochrome b5 and putidaredoxin, two effectors of camphor hydroxylase activity.

Authors:  Lingyun Rui; Susan Sondej Pochapsky; Thomas C Pochapsky
Journal:  Biochemistry       Date:  2006-03-28       Impact factor: 3.162

10.  Solution NMR structure of putidaredoxin-cytochrome P450cam complex via a combined residual dipolar coupling-spin labeling approach suggests a role for Trp106 of putidaredoxin in complex formation.

Authors:  Wei Zhang; Susan S Pochapsky; Thomas C Pochapsky; Nitin U Jain
Journal:  J Mol Biol       Date:  2008-09-20       Impact factor: 5.469

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