Literature DB >> 12841826

A brief primer on automated signal detection.

Manfred Hauben1.   

Abstract

BACKGROUND: Statistical techniques have traditionally been underused in spontaneous reporting systems used for postmarketing surveillance of adverse drug events. Regulatory agencies, pharmaceutical companies, and drug monitoring centers have recently devoted considerable efforts to develop and implement computer-assisted automated signal detection methodologies that employ statistical theory to enhance screening efforts of expert clinical reviewers.
OBJECTIVE: To provide a concise state-of-the-art review of the most commonly used automated signal detection procedures, including the underlying statistical concepts, performance characteristics, and outstanding limitations, and issues to be resolved. DATA SOURCES: Primary articles were identified by MEDLINE search (1965-December 2002) and through secondary sources. STUDY SELECTION AND DATA EXTRACTION: All of the articles identified from the data sources were evaluated and all information deemed relevant was included in this review. DATA SYNTHESIS: Commonly used methods of automated signal detection are self-contained and involve screening large databases of spontaneous adverse event reports in search of interestingly large disproportionalities or dependencies between significant variables, usually single drug-event pairs, based on an underlying model of statistical independence. The models vary according to the underlying model of statistical independence and whether additional mathematical modeling using Bayesian analysis is applied to the crude measures of disproportionality. There are many potential advantages and disadvantages of these methods, as well as significant unresolved issues related to the application of these techniques, including lack of comprehensive head-to-head comparisons in a single large transnational database, lack of prospective evaluations, and the lack of gold standard of signal detection.
CONCLUSIONS: Current methods of automated signal detection are nonclinical and only highlight deviations from independence without explaining whether these deviations are due to a causal linkage or numerous potential confounders. They therefore cannot replace expert clinical reviewers, but can help them to focus attention when confronted with the difficult task of screening huge numbers of drug-event combinations for potential signals. Important questions remain to be answered about the performance characteristics of these methods. Pharmacovigilance professionals should take the time to learn the underlying mathematical concepts in order to critically evaluate accumulating experience pertaining to the relative performance characteristics of these methods that are incompletely defined.

Mesh:

Year:  2003        PMID: 12841826     DOI: 10.1345/aph.1C515

Source DB:  PubMed          Journal:  Ann Pharmacother        ISSN: 1060-0280            Impact factor:   3.154


  27 in total

1.  Trimethoprim-induced hyperkalaemia -- lessons in data mining.

Authors:  Manfred Hauben
Journal:  Br J Clin Pharmacol       Date:  2004-09       Impact factor: 4.335

2.  Drug-induced pancreatitis: lessons in data mining.

Authors:  Manfred Hauben; Lester Reich
Journal:  Br J Clin Pharmacol       Date:  2004-11       Impact factor: 4.335

3.  Data mining in pharmacovigilance: the need for a balanced perspective.

Authors:  Manfred Hauben; Vaishali Patadia; Charles Gerrits; Louisa Walsh; Lester Reich
Journal:  Drug Saf       Date:  2005       Impact factor: 5.606

Review 4.  Perspectives on the use of data mining in pharmaco-vigilance.

Authors:  June Almenoff; Joseph M Tonning; A Lawrence Gould; Ana Szarfman; Manfred Hauben; Rita Ouellet-Hellstrom; Robert Ball; Ken Hornbuckle; Louisa Walsh; Chuen Yee; Susan T Sacks; Nancy Yuen; Vaishali Patadia; Michael Blum; Mike Johnston; Charles Gerrits; Harry Seifert; Karol Lacroix
Journal:  Drug Saf       Date:  2005       Impact factor: 5.606

5.  Reports of acute angle closure glaucoma-related adverse events with SSRIs: results of a disproportionality analysis.

Authors:  Manfred Hauben; Lester Reich
Journal:  CNS Drugs       Date:  2006       Impact factor: 5.749

Review 6.  Pharmacovigilance during the pre-approval phases: an evolving pharmaceutical industry model in response to ICH E2E, CIOMS VI, FDA and EMEA/CHMP risk-management guidelines.

Authors:  Craig G Hartford; Kasia S Petchel; Hani Mickail; Susana Perez-Gutthann; Mary McHale; John M Grana; Paula Marquez
Journal:  Drug Saf       Date:  2006       Impact factor: 5.606

7.  Postmarketing surveillance of potentially fatal reactions to oncology drugs: potential utility of two signal-detection algorithms.

Authors:  Manfred Hauben; Lester Reich; Stephanie Chung
Journal:  Eur J Clin Pharmacol       Date:  2004-11-17       Impact factor: 2.953

8.  Prospective data mining of six products in the US FDA Adverse Event Reporting System: disposition of events identified and impact on product safety profiles.

Authors:  Steven Bailey; Ajay Singh; Robert Azadian; Peter Huber; Michael Blum
Journal:  Drug Saf       Date:  2010-02-01       Impact factor: 5.606

9.  Using information mining of the medical literature to improve drug safety.

Authors:  Kanaka D Shetty; Siddhartha R Dalal
Journal:  J Am Med Inform Assoc       Date:  2011-05-05       Impact factor: 4.497

10.  Safety related drug-labelling changes: findings from two data mining algorithms.

Authors:  Manfred Hauben; Lester Reich
Journal:  Drug Saf       Date:  2004       Impact factor: 5.606

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