Literature DB >> 20082540

Prospective data mining of six products in the US FDA Adverse Event Reporting System: disposition of events identified and impact on product safety profiles.

Steven Bailey1, Ajay Singh, Robert Azadian, Peter Huber, Michael Blum.   

Abstract

BACKGROUND: The use of data mining has increased among regulators and pharmaceutical companies. The incremental value of data mining as an adjunct to traditional pharmacovigilance methods has yet to be demonstrated. Specifically, the utility in identifying new safety signals and the resources required to do so have not been elucidated.
OBJECTIVES: To analyse the number and types of disproportionately reported product-event combinations (DRPECs), as well as the final disposition of each, in order to understand the potential utility and resource implications of routinely conducting data mining in the US FDA Adverse Event Reporting System (AERS).
METHODS: We generated DRPECs from AERS for six of Wyeth's products, prospectively tracked their dispositions and evaluated the appropriate DRPECs in the company's safety database. We chose EB05 (the lower bound of the 90% confidence interval around the Empirical Bayes Geometric Mean) > or =2 as the appropriate metric, employing stratification based on age, sex and year of report.
RESULTS: A total of 861 DRPECs were identified - the average number of DRPECs was 144 per product. The proportion of unique preferred terms (PTs) in AERS for each drug with an EB05 > or =2 was similar across the six products (5.1-8.5%). Overall, 64.0% (551) of the DRPECs were closed after the initial screening (44.8% labelled, 14.3% indication related, 4.9% non-interpretable). An additional 9.9% (85) had been reviewed within the prior year and were not further reviewed. The remaining 26.1% (225) required full case review. After review of all pertinent reports and additional data, it was determined which of the DRPECs necessitated a formal review by the company's ongoing Safety Review Team (SRT) process. In total, 3.6% (31/861) of the DRPECs, yielding 16 medical concepts, were reviewed by the SRT, leading to seven labelling changes. These labelling changes involved 1.9% of all DRPECs generated. Four of the six compounds reviewed as part of this pilot had an identified labelling change. The workload required for this pilot, which was driven primarily by those DRPECs requiring review, was extensive, averaging 184 hours per product.
CONCLUSION: The number of DRPECs identified for each drug approximately correlated with the number of unique PTs in the database. Over one-half of DRPECs were either labelled as per the company's reference safety information (RSI) or were under review after identification by traditional pharmacovigilance activities, suggesting that for marketed products these methods do identify adverse events detected by traditional pharmacovigilance methods. Approximately three-quarters of the 861 DRPECs identified were closed without case review after triage. Of the approximately one-quarter of DRPECs that required formal case review, seven resulted in an addition to the RSI for the relevant products. While this pilot does not allow us to comment on the utility of routine data mining for all products, it is significant that several new safety concepts were identified through this prospective exercise.

Entities:  

Mesh:

Year:  2010        PMID: 20082540     DOI: 10.2165/11319000-000000000-00000

Source DB:  PubMed          Journal:  Drug Saf        ISSN: 0114-5916            Impact factor:   5.606


  27 in total

1.  A retrospective evaluation of a data mining approach to aid finding new adverse drug reaction signals in the WHO international database.

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Journal:  Drug Saf       Date:  2000-12       Impact factor: 5.606

Review 2.  Quantitative methods in pharmacovigilance: focus on signal detection.

Authors:  Manfred Hauben; Xiaofeng Zhou
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3.  Practical pharmacovigilance analysis strategies.

Authors:  A Lawrence Gould
Journal:  Pharmacoepidemiol Drug Saf       Date:  2003 Oct-Nov       Impact factor: 2.890

4.  Potential utility of data-mining algorithms for early detection of potentially fatal/disabling adverse drug reactions: a retrospective evaluation.

Authors:  Manfred Hauben; Lester Reich
Journal:  J Clin Pharmacol       Date:  2005-04       Impact factor: 3.126

5.  Extending the methods used to screen the WHO drug safety database towards analysis of complex associations and improved accuracy for rare events.

Authors:  G Niklas Norén; Andrew Bate; Roland Orre; I Ralph Edwards
Journal:  Stat Med       Date:  2006-11-15       Impact factor: 2.373

Review 6.  Data mining in spontaneous reports.

Authors:  Andrew Bate; I R Edwards
Journal:  Basic Clin Pharmacol Toxicol       Date:  2006-03       Impact factor: 4.080

7.  Comparative performance of two quantitative safety signalling methods: implications for use in a pharmacovigilance department.

Authors:  June S Almenoff; Karol K LaCroix; Nancy A Yuen; David Fram; William DuMouchel
Journal:  Drug Saf       Date:  2006       Impact factor: 5.606

8.  A Bayesian neural network method for adverse drug reaction signal generation.

Authors:  A Bate; M Lindquist; I R Edwards; S Olsson; R Orre; A Lansner; R M De Freitas
Journal:  Eur J Clin Pharmacol       Date:  1998-06       Impact factor: 2.953

9.  Safety related drug-labelling changes: findings from two data mining algorithms.

Authors:  Manfred Hauben; Lester Reich
Journal:  Drug Saf       Date:  2004       Impact factor: 5.606

Review 10.  Novel statistical tools for monitoring the safety of marketed drugs.

Authors:  J S Almenoff; E N Pattishall; T G Gibbs; W DuMouchel; S J W Evans; N Yuen
Journal:  Clin Pharmacol Ther       Date:  2007-05-30       Impact factor: 6.875

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  10 in total

1.  A decade of data mining and still counting.

Authors:  Manfred Hauben; G Niklas Norén
Journal:  Drug Saf       Date:  2010-07-01       Impact factor: 5.606

Review 2.  Postmarketing surveillance for "modified-risk" tobacco products.

Authors:  Richard J O'Connor
Journal:  Nicotine Tob Res       Date:  2011-01-20       Impact factor: 4.244

3.  Evaluating performance of electronic healthcare records and spontaneous reporting data in drug safety signal detection.

Authors:  Vaishali K Patadia; Martijn J Schuemie; Preciosa Coloma; Ron Herings; Johan van der Lei; Sabine Straus; Miriam Sturkenboom; Gianluca Trifirò
Journal:  Int J Clin Pharm       Date:  2014-12-09

4.  Zoo or savannah? Choice of training ground for evidence-based pharmacovigilance.

Authors:  G Niklas Norén; Ola Caster; Kristina Juhlin; Marie Lindquist
Journal:  Drug Saf       Date:  2014-09       Impact factor: 5.606

Review 5.  Machine Learning in Causal Inference: Application in Pharmacovigilance.

Authors:  Yiqing Zhao; Yue Yu; Hanyin Wang; Yikuan Li; Yu Deng; Guoqian Jiang; Yuan Luo
Journal:  Drug Saf       Date:  2022-05-17       Impact factor: 5.228

Review 6.  Data mining of the public version of the FDA Adverse Event Reporting System.

Authors:  Toshiyuki Sakaeda; Akiko Tamon; Kaori Kadoyama; Yasushi Okuno
Journal:  Int J Med Sci       Date:  2013-04-25       Impact factor: 3.738

7.  Statistical Signal Detection as a Routine Pharmacovigilance Practice: Effects of Periodicity and Resignalling Criteria on Quality and Workload.

Authors:  Magnus Lerch; Peter Nowicki; Katrin Manlik; Gabriela Wirsching
Journal:  Drug Saf       Date:  2015-12       Impact factor: 5.606

8.  Hypothesis-free signal detection in healthcare databases: finding its value for pharmacovigilance.

Authors:  Andrew Bate; Ken Hornbuckle; Juhaeri Juhaeri; Stephen P Motsko; Robert F Reynolds
Journal:  Ther Adv Drug Saf       Date:  2019-08-05

9.  Assessment of the real-world safety profile of vedolizumab using the United States Food and Drug Administration adverse event reporting system.

Authors:  Raymond K Cross; Michael Chiorean; Francis Vekeman; Yongling Xiao; Eric Wu; Jingdong Chao; Anthony W Wang
Journal:  PLoS One       Date:  2019-12-04       Impact factor: 3.240

10.  The Weber effect and the United States Food and Drug Administration's Adverse Event Reporting System (FAERS): analysis of sixty-two drugs approved from 2006 to 2010.

Authors:  Keith B Hoffman; Mo Dimbil; Colin B Erdman; Nicholas P Tatonetti; Brian M Overstreet
Journal:  Drug Saf       Date:  2014-04       Impact factor: 5.606

  10 in total

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