Literature DB >> 16231953

Perspectives on the use of data mining in pharmaco-vigilance.

June Almenoff1, Joseph M Tonning, A Lawrence Gould, Ana Szarfman, Manfred Hauben, Rita Ouellet-Hellstrom, Robert Ball, Ken Hornbuckle, Louisa Walsh, Chuen Yee, Susan T Sacks, Nancy Yuen, Vaishali Patadia, Michael Blum, Mike Johnston, Charles Gerrits, Harry Seifert, Karol Lacroix.   

Abstract

In the last 5 years, regulatory agencies and drug monitoring centres have been developing computerised data-mining methods to better identify reporting relationships in spontaneous reporting databases that could signal possible adverse drug reactions. At present, there are no guidelines or standards for the use of these methods in routine pharmaco-vigilance. In 2003, a group of statisticians, pharmaco-epidemiologists and pharmaco-vigilance professionals from the pharmaceutical industry and the US FDA formed the Pharmaceutical Research and Manufacturers of America-FDA Collaborative Working Group on Safety Evaluation Tools to review best practices for the use of these methods.In this paper, we provide an overview of: (i) the statistical and operational attributes of several currently used methods and their strengths and limitations; (ii) information about the characteristics of various postmarketing safety databases with which these tools can be deployed; (iii) analytical considerations for using safety data-mining methods and interpreting the results; and (iv) points to consider in integration of safety data mining with traditional pharmaco-vigilance methods. Perspectives from both the FDA and the industry are provided. Data mining is a potentially useful adjunct to traditional pharmaco-vigilance methods. The results of data mining should be viewed as hypothesis generating and should be evaluated in the context of other relevant data. The availability of a publicly accessible global safety database, which is updated on a frequent basis, would further enhance detection and communication about safety issues.

Mesh:

Year:  2005        PMID: 16231953     DOI: 10.2165/00002018-200528110-00002

Source DB:  PubMed          Journal:  Drug Saf        ISSN: 0114-5916            Impact factor:   5.606


  52 in total

1.  Data mining in the US Vaccine Adverse Event Reporting System (VAERS): early detection of intussusception and other events after rotavirus vaccination.

Authors:  M T Niu; D E Erwin; M M Braun
Journal:  Vaccine       Date:  2001-09-14       Impact factor: 3.641

Review 2.  Quantitative methods in pharmacovigilance: focus on signal detection.

Authors:  Manfred Hauben; Xiaofeng Zhou
Journal:  Drug Saf       Date:  2003       Impact factor: 5.606

3.  On the assessment of adverse drug reactions from spontaneous reporting systems: the influence of under-reporting on odds ratios.

Authors:  Peter G M van der Heijden; Eugène P van Puijenbroek; Stef van Buuren; Jacques W van der Hofstede
Journal:  Stat Med       Date:  2002-07-30       Impact factor: 2.373

4.  Use of measures of disproportionality in pharmacovigilance: three Dutch examples.

Authors:  Antoine C G Egberts; Ronald H B Meyboom; Eugène P van Puijenbroek
Journal:  Drug Saf       Date:  2002       Impact factor: 5.606

5.  A tree-based scan statistic for database disease surveillance.

Authors:  Martin Kulldorff; Zixing Fang; Stephen J Walsh
Journal:  Biometrics       Date:  2003-06       Impact factor: 2.571

6.  A Bayesian neural network method for adverse drug reaction signal generation.

Authors:  A Bate; M Lindquist; I R Edwards; S Olsson; R Orre; A Lansner; R M De Freitas
Journal:  Eur J Clin Pharmacol       Date:  1998-06       Impact factor: 2.953

7.  Re: "Confounding by indication and channeling over time: the risks of beta2-agonists".

Authors:  N Pearce; R Beasley; J Crane; C Burgess
Journal:  Am J Epidemiol       Date:  1997-11-15       Impact factor: 4.897

Review 8.  Variability in patterns of drug usage.

Authors:  H G Leufkens; J Urquhart
Journal:  J Pharm Pharmacol       Date:  1994-05       Impact factor: 3.765

9.  Safety related drug-labelling changes: findings from two data mining algorithms.

Authors:  Manfred Hauben; Lester Reich
Journal:  Drug Saf       Date:  2004       Impact factor: 5.606

10.  Randomised comparison of thalidomide versus placebo in toxic epidermal necrolysis.

Authors:  P Wolkenstein; J Latarjet; J C Roujeau; C Duguet; S Boudeau; L Vaillant; M Maignan; M H Schuhmacher; B Milpied; A Pilorget; H Bocquet; C Brun-Buisson; J Revuz
Journal:  Lancet       Date:  1998-11-14       Impact factor: 79.321

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  70 in total

1.  Validation of statistical signal detection procedures in eudravigilance post-authorization data: a retrospective evaluation of the potential for earlier signalling.

Authors:  Yolanda Alvarez; Ana Hidalgo; Francois Maignen; Jim Slattery
Journal:  Drug Saf       Date:  2010-06-01       Impact factor: 5.606

2.  A decade of data mining and still counting.

Authors:  Manfred Hauben; G Niklas Norén
Journal:  Drug Saf       Date:  2010-07-01       Impact factor: 5.606

3.  Biclustering of adverse drug events in the FDA's spontaneous reporting system.

Authors:  R Harpaz; H Perez; H S Chase; R Rabadan; G Hripcsak; C Friedman
Journal:  Clin Pharmacol Ther       Date:  2010-12-29       Impact factor: 6.875

4.  Antimicrobials and the risk of torsades de pointes: the contribution from data mining of the US FDA Adverse Event Reporting System.

Authors:  Elisabetta Poluzzi; Emanuel Raschi; Domenico Motola; Ugo Moretti; Fabrizio De Ponti
Journal:  Drug Saf       Date:  2010-04-01       Impact factor: 5.606

5.  An experimental investigation of masking in the US FDA adverse event reporting system database.

Authors:  Hsin-wei Wang; Alan M Hochberg; Ronald K Pearson; Manfred Hauben
Journal:  Drug Saf       Date:  2010-12-01       Impact factor: 5.606

6.  Performance of Stratified and Subgrouped Disproportionality Analyses in Spontaneous Databases.

Authors:  Suzie Seabroke; Gianmario Candore; Kristina Juhlin; Naashika Quarcoo; Antoni Wisniewski; Ramin Arani; Jeffery Painter; Philip Tregunno; G Niklas Norén; Jim Slattery
Journal:  Drug Saf       Date:  2016-04       Impact factor: 5.606

7.  Drug-induced hepatic injury in children: a case/non-case study of suspected adverse drug reactions in VigiBase.

Authors:  Carmen Ferrajolo; Annalisa Capuano; Katia M C Verhamme; Martijn Schuemie; Francesco Rossi; Bruno H Stricker; Miriam C J M Sturkenboom
Journal:  Br J Clin Pharmacol       Date:  2010-11       Impact factor: 4.335

8.  Reply: The evaluation of data mining methods for the simultaneous and systematic detection of safety signals in large databases: lessons to be learned.

Authors:  Jonathan G Levine; Joseph M Tonning; Ana Szarfman
Journal:  Br J Clin Pharmacol       Date:  2006-01       Impact factor: 4.335

9.  What is drug safety?: celebrating 20 years of the Drug Safety journal.

Authors:  I Ralph Edwards
Journal:  Drug Saf       Date:  2006       Impact factor: 5.606

Review 10.  Using social media in safety signal management: is it reliable?

Authors:  Sue Rees; Sadiqa Mian; Neal Grabowski
Journal:  Ther Adv Drug Saf       Date:  2018-08-09
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