Literature DB >> 12837805

Crystal structures of Mycobacterium smegmatis RecA and its nucleotide complexes.

S Datta1, R Krishna, N Ganesh, Nagasuma R Chandra, K Muniyappa, M Vijayan.   

Abstract

The crystal structures of Mycobacterium smegmatis RecA (RecA(Ms)) and its complexes with ADP, ATPgammaS, and dATP show that RecA(Ms) has an expanded binding site like that in Mycobacterium tuberculosis RecA, although there are small differences between the proteins in their modes of nucleotide binding. Nucleotide binding is invariably accompanied by the movement of Gln 196, which appears to provide the trigger for transmitting the effect of nucleotide binding to the DNA-binding loops. These observations provide a framework for exploring the known properties of the RecA proteins.

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Year:  2003        PMID： 12837805      PMCID： PMC164864          DOI： 10.1128/JB.185.14.4280-4284.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  15 in total

1.  Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation.

Authors:  S Datta; M M Prabu; M B Vaze; N Ganesh; N R Chandra; K Muniyappa; M Vijayan
Journal:  Nucleic Acids Res       Date:  2000-12-15       Impact factor: 16.971

Review 2.  Recombinational DNA repair in bacteria and the RecA protein.

Authors:  M M Cox
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1999

Review 3.  Databases in protein crystallography.

Authors:  G J Kleywegt; T A Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-11-01

4.  ATP-mediated conformational changes in the RecA filament.

Authors:  Margaret S VanLoock; Xiong Yu; Shixin Yang; Alex L Lai; Claudia Low; Michael J Campbell; Edward H Egelman
Journal:  Structure       Date:  2003-02       Impact factor: 5.006

5.  Structural studies on MtRecA-nucleotide complexes: insights into DNA and nucleotide binding and the structural signature of NTP recognition.

Authors:  S Datta; N Ganesh; Nagasuma R Chandra; K Muniyappa; M Vijayan
Journal:  Proteins       Date:  2003-02-15

6.  Structure of the recA protein-ADP complex.

Authors:  R M Story; T A Steitz
Journal:  Nature       Date:  1992-01-23       Impact factor: 49.962

7.  Gene replacement and expression of foreign DNA in mycobacteria.

Authors:  R N Husson; B E James; R A Young
Journal:  J Bacteriol       Date:  1990-02       Impact factor: 3.490

8.  Mycobacterium smegmatis RecA protein is structurally similar to but functionally distinct from Mycobacterium tuberculosis RecA.

Authors:  N Ganesh; K Muniyappa
Journal:  Proteins       Date:  2003-10-01

9.  The structure of the E. coli recA protein monomer and polymer.

Authors:  R M Story; I T Weber; T A Steitz
Journal:  Nature       Date:  1992-01-23       Impact factor: 49.962

10.  Arrangement of RecA protein in its active filament determined by polarized-light spectroscopy.

Authors:  Katsumi Morimatsu; Masayuki Takahashi; Bengt Nordén
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-22       Impact factor: 11.205
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  21 in total

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Authors:  J Rajan Prabu; S Thamotharan; Jasbeer Singh Khanduja; Emily Zabala Alipio; Chang Yub Kim; Geoffrey S Waldo; Thomas C Terwilliger; Brent Segelke; Tim Lekin; Dominique Toppani; Li Wei Hung; Minmin Yu; Evan Bursey; K Muniyappa; Nagasuma R Chandra; M Vijayan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-07-24

2.  Evidence for a structural relationship between BRCT domains and the helicase domains of the replication initiators encoded by the Polyomaviridae and Papillomaviridae families of DNA tumor viruses.

Authors:  Anuradha Kumar; Woo S Joo; Gretchen Meinke; Stephanie Moine; Elena N Naumova; Peter A Bullock
Journal:  J Virol       Date:  2008-06-25       Impact factor: 5.103

3.  Presynaptic filament dynamics in homologous recombination and DNA repair.

Authors:  Jie Liu; Kirk T Ehmsen; Wolf-Dietrich Heyer; Scott W Morrical
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-06       Impact factor: 8.250

4.  Kinesin Motor Enzymology: Chemistry, Structure, and Physics of Nanoscale Molecular Machines.

Authors:  J C Cochran
Journal:  Biophys Rev       Date:  2015-02-13

Review 5.  Allosteric movements in eubacterial RecA.

Authors:  Anu V Chandran; M Vijayan
Journal:  Biophys Rev       Date:  2012-10-23

6.  Structural studies on Mycobacterium tuberculosis RecA: molecular plasticity and interspecies variability.

Authors:  Anu V Chandran; J Rajan Prabu; Astha Nautiyal; K Neelakanteshwar Patil; K Muniyappa; M Vijayan
Journal:  J Biosci       Date:  2015-03       Impact factor: 1.826

7.  Expression, purification, crystallization and preliminary X-ray crystallographic analysis of pantothenate kinase from Mycobacterium tuberculosis.

Authors:  Satyabrata Das; Parimal Kumar; Vikrant Bhor; A Surolia; M Vijayan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2004-11-09

8.  Essential roles for imuA'- and imuB-encoded accessory factors in DnaE2-dependent mutagenesis in Mycobacterium tuberculosis.

Authors:  Digby F Warner; Duduzile E Ndwandwe; Garth L Abrahams; Bavesh D Kana; Edith E Machowski; Ceslovas Venclovas; Valerie Mizrahi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-06       Impact factor: 11.205

9.  Two modes of binding of DinI to RecA filament provide a new insight into the regulation of SOS response by DinI protein.

Authors:  Vitold E Galkin; Rachel L Britt; Lukas B Bane; Xiong Yu; Michael M Cox; Edward H Egelman
Journal:  J Mol Biol       Date:  2011-03-31       Impact factor: 5.469

10.  The SOS Regulatory Network.

Authors:  Lyle A Simmons; James J Foti; Susan E Cohen; Graham C Walker
Journal:  EcoSal Plus       Date:  2008-07-25
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