Literature DB >> 12835994

Genome size and base composition of five Pinus species from the Balkan region.

F Bogunic1, E Muratovic, S C Brown, S Siljak-Yakovlev.   

Abstract

The 2C DNA content and base composition of five Pinus (2 n=24) species and two Pinus subspecies from the Balkan region have been estimated by flow cytometry. P. heldreichii (five populations) and P. peuce (one population) were assessed for the first time, as also were subspecies of P. nigra (three populations-two of subspecies nigra and one of subspecies dalmatica) along with P. sylvestris, and P. mugo from the same region. The 2C DNA values of these Pinus ranged from 42.5 pg to 54.9 pg (41.7-53.8 x 10(9)bp), and the base composition was quite stable (about 39.5% GC). Significant differences were observed between two subspecies of P. nigra and even between two populations of subsp. nigra. The two other species (P. sylvestris and P. mugo) had 2C values of 42.5 pg and 42.8 pg, respectively, while that of P. peuce was 54.9 pg. These genome sizes are in accordance with published values except for P. sylvestris, which was 20% below estimates made by other authors.

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Year:  2003        PMID: 12835994     DOI: 10.1007/s00299-003-0653-2

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  5 in total

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3.  Heterochromatin study demonstrating the non-linearity of fluorometry useful for calculating genomic base composition.

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Journal:  Cytometry       Date:  1993

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Authors:  S. Siljak-Yakovlev; M. Cerbah; J. Coulaud; V. Stoian; S. C. Brown; V. Zoldos; S. Jelenic; D. Papes
Journal:  Theor Appl Genet       Date:  2002-02       Impact factor: 5.699

5.  Lack of correlation between AT frequency and genome size in higher plants and the effect of nonrandomness of base sequences on dye binding.

Authors:  Martin Barow; Armin Meister
Journal:  Cytometry       Date:  2002-01-01
  5 in total
  11 in total

Review 1.  Plant DNA flow cytometry and estimation of nuclear genome size.

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5.  Insights from the GC content analysis of 76genome survey sequences (GSS) from Elaeisoleifera.

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8.  Development of genomic resources for Citrus clementina: characterization of three deep-coverage BAC libraries and analysis of 46,000 BAC end sequences.

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9.  Essential Oil Composition of Pinus peuce Griseb. Needles and Twigs from Two National Parks of Kosovo.

Authors:  Avni Hajdari; Behxhet Mustafa; Dashnor Nebija; Hyrmete Selimi; Zeqir Veselaj; Pranvera Breznica; Cassandra Leah Quave; Johannes Novak
Journal:  ScientificWorldJournal       Date:  2016-08-08

10.  Intraspecific variations in cardamom (Elettaria cardamomum Maton): assessment of genomic diversity by flow cytometry, cytological studies and ISSR analysis.

Authors:  N Anjali; K M Ganga; F Nadiya; S Shefeek; K K Sabu
Journal:  Springerplus       Date:  2016-09-13
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