Literature DB >> 18347800

Chromosomal DNA content of sweet pepper determined by association of cytogenetic and cytometric tools.

Isabella Santiago de Abreu1, Carlos Roberto Carvalho, Wellington Ronildo Clarindo.   

Abstract

The nuclear DNA content of sweet pepper (Capsicum annuum L. var. annuum, 2n = 24) has been measured by flow and image cytometries but the DNA content of each chromosome of this species has not yet been regarded. DNA content of individual chromosomes has been quantified by the flow karyotyping technique, which requires a great quantity of intact metaphasic chromosomes and methods that allow the characterization of individual chromosomes; however, the obtainment of adequate number of metaphases can be difficult in some species like C. annuum. In order to estimate the DNA content of each C. annuum var. annuum cv. "New Mexican" chromosome, flow and image cytometries were associated with the cytogenetic methodology. First, the DNA amount (2C = 6.90 pg) was established by flow cytometry. Integrated optical density (IOD) values were calculated by image cytometry for each Feulgen stained metaphasic chromosome. Then, by distributing the correspondent metaphasic value (4C = 13.80 pg) proportionally to average IOD values, the following chromosomal DNA contents were obtained in pg: 0.74 (chromosome 1), 0.67 (2), 0.61 (3, 4), 0.60 (5), 0.59 (6, 7), 0.58 (8), 0.57 (9), 0.56 (10) and 0.39 (11, 12). This study reports an alternative and reproducible technique that makes quantifying the chromosomal DNA content possible.

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Year:  2008        PMID: 18347800     DOI: 10.1007/s00299-008-0539-4

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  25 in total

1.  From pixels to picograms: a beginners' guide to genome quantification by Feulgen image analysis densitometry.

Authors:  David C Hardie; T Ryan Gregory; Paul D N Hebert
Journal:  J Histochem Cytochem       Date:  2002-06       Impact factor: 2.479

2.  Standardisation of DNA quantitation by image analysis: quality control of instrumentation.

Authors:  M Puech; F Giroud
Journal:  Cytometry       Date:  1999-05-01

3.  Nuclear DNA content and genome size of trout and human.

Authors:  J Dolezel; J Bartos; H Voglmayr; J Greilhuber
Journal:  Cytometry A       Date:  2003-02       Impact factor: 4.355

Review 4.  Flow cytogenetics and plant genome mapping.

Authors:  Jaroslav Dolezel; Marie Kubaláková; Jan Bartos; Jirí Macas
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

5.  Conservation of gene repertoire but not gene order in pepper and tomato.

Authors:  S D Tanksley; R Bernatzky; N L Lapitan; J P Prince
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

Review 6.  Chromosome-based genomics in the cereals.

Authors:  Jaroslav Dolezel; Marie Kubaláková; Etienne Paux; Jan Bartos; Catherine Feuillet
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

7.  Comparison of four nuclear isolation buffers for plant DNA flow cytometry.

Authors:  João Loureiro; Eleazar Rodriguez; Jaroslav Dolezel; Conceição Santos
Journal:  Ann Bot       Date:  2006-07-04       Impact factor: 4.357

8.  Flow karyotyping and sorting of Vicia faba chromosomes.

Authors:  S Lucretti; J Doležel; I Schubert; J Fuchs
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

9.  Analysis of nuclear DNA content in Capsicum (Solanaceae) by flow cytometry and Feulgen densitometry.

Authors:  Eduardo A Moscone; Monika Baranyi; Irma Ebert; Johann Greilhuber; Friedrich Ehrendorfer; Armando T Hunziker
Journal:  Ann Bot       Date:  2003-07       Impact factor: 4.357

10.  Flow cytometric and Feulgen densitometric analysis of genome size variation in Pisum.

Authors:  M Baranyi; J Greilhuber
Journal:  Theor Appl Genet       Date:  1996-03       Impact factor: 5.699

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  4 in total

1.  Revisiting the DNA C-values of the genome size-standards used in plant flow cytometry to choose the "best primary standards".

Authors:  Milene Miranda Praça-Fontes; Carlos Roberto Carvalho; Wellington Ronildo Clarindo; Cosme Damião Cruz
Journal:  Plant Cell Rep       Date:  2011-02-13       Impact factor: 4.570

2.  DNA content differences between male and female chicken (Gallus gallus domesticus) nuclei and Z and W chromosomes resolved by image cytometry.

Authors:  Maria Andréia Corrêa Mendonça; Carlos Roberto Carvalho; Wellington Ronildo Clarindo
Journal:  J Histochem Cytochem       Date:  2009-10-29       Impact factor: 2.479

3.  Comparison of the Coffea canephora and C. arabica karyotype based on chromosomal DNA content.

Authors:  Wellington Ronildo Clarindo; Carlos Roberto Carvalho
Journal:  Plant Cell Rep       Date:  2008-10-08       Impact factor: 4.570

4.  Updating the maize karyotype by chromosome DNA sizing.

Authors:  Jéssica Coutinho Silva; Carlos Roberto Carvalho; Wellington Ronildo Clarindo
Journal:  PLoS One       Date:  2018-01-02       Impact factor: 3.240

  4 in total

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