Literature DB >> 12582725

Nuclear DNA content, base composition, heterochromatin and rDNA in Picea omorika and Picea abies.

S. Siljak-Yakovlev1, M. Cerbah, J. Coulaud, V. Stoian, S. C. Brown, V. Zoldos, S. Jelenic, D. Papes.   

Abstract

Two closely related spruces, Picea abies and Picea omorika, a Balkan paleoendemic species, often share habitats, yet never hybridize in nature. The present study adresses their characteristics such as nuclear DNA content, base composition, heterochromatin and rDNA pattern. The genome size of P. abies was 10% larger than that of P. omorika when assessed by flow cytometry, respectively 2C=37.2 pg and 33.8 pg; although when estimated as total chromosome length it was virtually the same. The heterochromatin Chromomycin-A (CMA)/ DAPI fluorochrome banding patterns of both P. abies and P. omorikaare given here for the first time. Simultaneous FISH (fluorescent in situ hybridization) using 18S-26S and 5S rDNA probes revealed 16 18S rDNA sites in P. omorika, 12 18S rDNA sites in P. abies, and a single 5S rDNA locus in both species. The genomes have about 41% GC. The number and position of CMA/DAPI bands and rDNA loci provide good chromosome markers to clarify the karyotypes of the two species.

Entities:  

Year:  2002        PMID: 12582725     DOI: 10.1007/s001220100755

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  17 in total

1.  Karyotype of Norway spruce by multicolor FISH.

Authors:  M Vischi; I Jurman; G Bianchi; M Morgante
Journal:  Theor Appl Genet       Date:  2003-06-25       Impact factor: 5.699

2.  Genome size and base composition of five Pinus species from the Balkan region.

Authors:  F Bogunic; E Muratovic; S C Brown; S Siljak-Yakovlev
Journal:  Plant Cell Rep       Date:  2003-06-27       Impact factor: 4.570

3.  Two classes of 5S rDNA unit arrays of the silver fir, Abies alba Mill.: structure, localization and evolution.

Authors:  Visnja Besendorfer; Iva Krajacić-Sokol; Srećko Jelenić; Jasna Puizina; Jelena Mlinarec; Tonka Sviben; Drazena Papes
Journal:  Theor Appl Genet       Date:  2005-01-19       Impact factor: 5.699

4.  Plant centromeric retrotransposons: a structural and cytogenetic perspective.

Authors:  Pavel Neumann; Alice Navrátilová; Andrea Koblížková; Eduard Kejnovský; Eva Hřibová; Roman Hobza; Alex Widmer; Jaroslav Doležel; Jiří Macas
Journal:  Mob DNA       Date:  2011-03-03

5.  The chromosomal distribution of histone methylation marks in gymnosperms differs from that of angiosperms.

Authors:  Jörg Fuchs; Gabriele Jovtchev; Ingo Schubert
Journal:  Chromosome Res       Date:  2008-08-09       Impact factor: 5.239

6.  Molecular evolution of regulatory genes in spruces from different species and continents: heterogeneous patterns of linkage disequilibrium and selection but correlated recent demographic changes.

Authors:  Marie-Claire Namroud; Carine Guillet-Claude; John Mackay; Nathalie Isabel; Jean Bousquet
Journal:  J Mol Evol       Date:  2010-03-31       Impact factor: 2.395

7.  Near-saturated and complete genetic linkage map of black spruce (Picea mariana).

Authors:  Bum-Yong Kang; Ishminder K Mann; John E Major; Om P Rajora
Journal:  BMC Genomics       Date:  2010-09-24       Impact factor: 3.969

8.  A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers.

Authors:  V Acheré; P Faivre-Rampant; S Jeandroz; G Besnard; T Markussen; A Aragones; M Fladung; E Ritter; J-M Favre
Journal:  Theor Appl Genet       Date:  2004-02-27       Impact factor: 5.699

9.  Molecular organization and chromosomal localization of 5S rDNA in Amazonian Engystomops (Anura, Leiuperidae).

Authors:  Débora Silva Rodrigues; Miryan Rivera; Luciana Bolsoni Lourenço
Journal:  BMC Genet       Date:  2012-03-20       Impact factor: 2.797

10.  Dancing together and separate again: gymnosperms exhibit frequent changes of fundamental 5S and 35S rRNA gene (rDNA) organisation.

Authors:  S Garcia; A Kovařík
Journal:  Heredity (Edinb)       Date:  2013-03-20       Impact factor: 3.821

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