Literature DB >> 12820965

An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation.

Andreas Savelsbergh1, Vladimir I Katunin, Dagmar Mohr, Frank Peske, Marina V Rodnina, Wolfgang Wintermeyer.   

Abstract

The elongation cycle of protein synthesis is completed by translocation, a rearrangement during which two tRNAs bound to the mRNA move on the ribosome. The reaction is promoted by elongation factor G (EF-G) and accelerated by GTP hydrolysis. Here we report a pre-steady-state kinetic analysis of translocation. The kinetic model suggests that GTP hydrolysis drives a conformational rearrangement of the ribosome that precedes and limits the rates of tRNA-mRNA translocation and Pi release from EF-G.GDP.Pi. The latter two steps are intrinsically rapid and take place at random. These results indicate that the energy of GTP hydrolysis is utilized to promote the ribosome rearrangement and to bias spontaneous fluctuations within the ribosome-EF-G complex toward unidirectional movement of mRNA and tRNA.

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Year:  2003        PMID: 12820965     DOI: 10.1016/s1097-2765(03)00230-2

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  144 in total

1.  Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation.

Authors:  Christian M T Spahn; Maria G Gomez-Lorenzo; Robert A Grassucci; Rene Jørgensen; Gregers R Andersen; Roland Beckmann; Pawel A Penczek; Juan P G Ballesta; Joachim Frank
Journal:  EMBO J       Date:  2004-02-19       Impact factor: 11.598

2.  Messenger RNA interactions in the decoding center control the rate of translocation.

Authors:  Prashant K Khade; Simpson Joseph
Journal:  Nat Struct Mol Biol       Date:  2011-10-23       Impact factor: 15.369

3.  Kinetic schemes for post-synchronized single molecule dynamics.

Authors:  Chunlai Chen; Michael J Greenberg; Joseph M Laakso; E Michael Ostap; Yale E Goldman; Henry Shuman
Journal:  Biophys J       Date:  2012-03-20       Impact factor: 4.033

4.  Allosteric vs. spontaneous exit-site (E-site) tRNA dissociation early in protein synthesis.

Authors:  Chunlai Chen; Benjamin Stevens; Jaskiran Kaur; Zeev Smilansky; Barry S Cooperman; Yale E Goldman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-03       Impact factor: 11.205

5.  The conserved protein EF4 (LepA) modulates the elongation cycle of protein synthesis.

Authors:  Hanqing Liu; Chunlai Chen; Haibo Zhang; Jaskiran Kaur; Yale E Goldman; Barry S Cooperman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

6.  Ribosome dynamics and tRNA movement by time-resolved electron cryomicroscopy.

Authors:  Niels Fischer; Andrey L Konevega; Wolfgang Wintermeyer; Marina V Rodnina; Holger Stark
Journal:  Nature       Date:  2010-07-15       Impact factor: 49.962

7.  The ribosome moves: RNA mechanics and translocation.

Authors:  Harry F Noller; Laura Lancaster; Jie Zhou; Srividya Mohan
Journal:  Nat Struct Mol Biol       Date:  2017-12-07       Impact factor: 15.369

8.  Structure of the ribosome with elongation factor G trapped in the pretranslocation state.

Authors:  Axel F Brilot; Andrei A Korostelev; Dmitri N Ermolenko; Nikolaus Grigorieff
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

9.  Visualization of two transfer RNAs trapped in transit during elongation factor G-mediated translocation.

Authors:  David J F Ramrath; Laura Lancaster; Thiemo Sprink; Thorsten Mielke; Justus Loerke; Harry F Noller; Christian M T Spahn
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

Review 10.  Ribosomal translocation: one step closer to the molecular mechanism.

Authors:  Shinichiro Shoji; Sarah E Walker; Kurt Fredrick
Journal:  ACS Chem Biol       Date:  2009-02-20       Impact factor: 5.100

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