Literature DB >> 12805231

The nuclear actin-related proteins Arp7 and Arp9: a dimeric module that cooperates with architectural proteins for chromatin remodeling.

Heather Szerlong1, Anjanabha Saha, Bradley R Cairns.   

Abstract

Nuclear actin-related proteins (ARPs) are essential components of chromatin remodeling and modifying complexes, but their functions and relationship to actin remain elusive. The yeast SWI/SNF and RSC complexes contain Arp7 and Arp9, and are shown to form a stable heterodimer with the properties of a functional module. Arp7 and Arp9 rely on their actin-related regions for heterodimerization, and their unique C-termini cooperate for assembly into RSC. We suggest that regulated ARP-ARP (and possibly ARP-beta-actin) heterodimerization might be a conserved feature of chromatin complexes. A RSC complex lacking Arp7/9 was isolated that displays robust nucleosome remodeling activity, suggesting a separate essential role for ARPs in the regulation of chromatin structure. A screen for suppressors of arp mutations yielded the DNA bending architectural transcription factor Nhp6, which interacts with RSC complex physically and functionally and shows facilitated binding to nucleosomes by RSC. We propose that Arp7/9 dimers function with DNA bending proteins to facilitate proper chromatin architecture and complex- complex interactions.

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Year:  2003        PMID: 12805231      PMCID: PMC162148          DOI: 10.1093/emboj/cdg296

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  51 in total

1.  Genome-wide location and regulated recruitment of the RSC nucleosome-remodeling complex.

Authors:  Huck Hui Ng; François Robert; Richard A Young; Kevin Struhl
Journal:  Genes Dev       Date:  2002-04-01       Impact factor: 11.361

2.  Chromatin remodeling by RSC involves ATP-dependent DNA translocation.

Authors:  Anjanabha Saha; Jacqueline Wittmeyer; Bradley R Cairns
Journal:  Genes Dev       Date:  2002-08-15       Impact factor: 11.361

3.  Atomic structure of the actin:DNase I complex.

Authors:  W Kabsch; H G Mannherz; D Suck; E F Pai; K C Holmes
Journal:  Nature       Date:  1990-09-06       Impact factor: 49.962

4.  The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding.

Authors:  Tiziana Bonaldi; Gernot Längst; Ralf Strohner; Peter B Becker; Marco E Bianchi
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

5.  Purification and biochemical heterogeneity of the mammalian SWI-SNF complex.

Authors:  W Wang; J Côté; Y Xue; S Zhou; P A Khavari; S R Biggar; C Muchardt; G V Kalpana; S P Goff; M Yaniv; J L Workman; G R Crabtree
Journal:  EMBO J       Date:  1996-10-01       Impact factor: 11.598

Review 6.  The actin fold.

Authors:  W Kabsch; K C Holmes
Journal:  FASEB J       Date:  1995-02       Impact factor: 5.191

Review 7.  Nuclear actin and actin-related proteins in chromatin remodeling.

Authors:  Ivan A Olave; Samara L Reck-Peterson; Gerald R Crabtree
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

8.  Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro.

Authors:  T T Paull; M Carey; R C Johnson
Journal:  Genes Dev       Date:  1996-11-01       Impact factor: 11.361

9.  Epigenetic effects on yeast transcription caused by mutations in an actin-related protein present in the nucleus.

Authors:  Y W Jiang; D J Stillman
Journal:  Genes Dev       Date:  1996-03-01       Impact factor: 11.361

10.  NHP6A and NHP6B, which encode HMG1-like proteins, are candidates for downstream components of the yeast SLT2 mitogen-activated protein kinase pathway.

Authors:  C Costigan; D Kolodrubetz; M Snyder
Journal:  Mol Cell Biol       Date:  1994-04       Impact factor: 4.272

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  53 in total

1.  A mutation in the Cc.arp9 gene encoding a putative actin-related protein causes defects in fruiting initiation and asexual development in the agaricomycete Coprinopsis cinerea.

Authors:  Takehito Nakazawa; Yuki Ando; Takeshi Hata; Kiyoshi Nakahori
Journal:  Curr Genet       Date:  2016-01-08       Impact factor: 3.886

Review 2.  Actin, actin-binding proteins, and actin-related proteins in the nucleus.

Authors:  Ildikó Kristó; Izabella Bajusz; Csaba Bajusz; Péter Borkúti; Péter Vilmos
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

3.  Role of Nhp6 and Hmo1 in SWI/SNF occupancy and nucleosome landscape at gene regulatory regions.

Authors:  Matias I Hepp; Michaela Smolle; Cristian Gidi; Roberto Amigo; Nicole Valenzuela; Axel Arriagada; Alejandro Maureira; Madelaine M Gogol; Marcela Torrejón; Jerry L Workman; José L Gutiérrez
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-01-09       Impact factor: 4.490

4.  Opposing roles for Set2 and yFACT in regulating TBP binding at promoters.

Authors:  Debabrata Biswas; Rinku Dutta-Biswas; Doyel Mitra; Yoichiro Shibata; Brian D Strahl; Tim Formosa; David J Stillman
Journal:  EMBO J       Date:  2006-09-14       Impact factor: 11.598

5.  Sequence and comparative genomic analysis of actin-related proteins.

Authors:  Jean Muller; Yukako Oma; Laurent Vallar; Evelyne Friederich; Olivier Poch; Barbara Winsor
Journal:  Mol Biol Cell       Date:  2005-09-29       Impact factor: 4.138

Review 6.  Nuclear actin-related proteins as epigenetic regulators of development.

Authors:  Richard B Meagher; Roger B Deal; Muthugapatti K Kandasamy; Elizabeth C McKinney
Journal:  Plant Physiol       Date:  2005-12       Impact factor: 8.340

Review 7.  ATP-dependent chromatin remodeling factors and DNA damage repair.

Authors:  Mary Ann Osley; Toyoko Tsukuda; Jac A Nickoloff
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

Review 8.  INO80 subfamily of chromatin remodeling complexes.

Authors:  Yunhe Bao; Xuetong Shen
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

9.  Structural variations in protein superfamilies: actin and tubulin.

Authors:  Richard H Wade; Isabel Garcia-Saez; Frank Kozielski
Journal:  Mol Biotechnol       Date:  2009-01-08       Impact factor: 2.695

10.  High-level activation of transcription of the yeast U6 snRNA gene in chromatin by the basal RNA polymerase III transcription factor TFIIIC.

Authors:  Sushma Shivaswamy; George A Kassavetis; Purnima Bhargava
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

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