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Literature DB >> 17316710

INO80 subfamily of chromatin remodeling complexes.

Abstract

ATP-dependent chromatin remodeling complexes contain ATPases of the Swi/Snf superfamily and alter DNA accessibility of chromatin in an ATP-dependent manner. Recently characterized INO80 and SWR1 complexes belong to a subfamily of these chromatin remodelers and are characterized by a split ATPase domain in the core ATPase subunit and the presence of Rvb proteins. INO80 and SWR1 complexes are evolutionarily conserved from yeast to human and have been implicated in transcription regulation, as well as DNA repair. The individual components, assembly patterns, and molecular mechanisms of the INO80 class of chromatin remodeling complexes are discussed in this review.

Entities: Chemical Gene Species

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Year: 2007 PMID： 17316710 PMCID： PMC2699258 DOI： 10.1016/j.mrfmmm.2006.10.006

Source DB: PubMed Journal: Mutat Res ISSN： 0027-5107 Impact factor: 2.433

103 in total

1. RNA interference demonstrates a novel role for H2A.Z in chromosome segregation.

Authors: Danny Rangasamy; Ian Greaves; David J Tremethick
Journal: Nat Struct Mol Biol Date: 2004-06-13 Impact factor: 15.369

Review 2. Mechanisms for ATP-dependent chromatin remodelling: farewell to the tuna-can octamer?

Authors: Andrew Flaus; Tom Owen-Hughes
Journal: Curr Opin Genet Dev Date: 2004-04 Impact factor: 5.578

Review 3. The highly conserved and multifunctional NuA4 HAT complex.

Authors: Yannick Doyon; Jacques Côté
Journal: Curr Opin Genet Dev Date: 2004-04 Impact factor: 5.578

Review 4. Histone variants, nucleosome assembly and epigenetic inheritance.

Authors: Steven Henikoff; Takehito Furuyama; Kami Ahmad
Journal: Trends Genet Date: 2004-07 Impact factor: 11.639

Review 5. ATP-dependent nucleosome remodelling: factors and functions.

Authors: Anton Eberharter; Peter B Becker
Journal: J Cell Sci Date: 2004-08-01 Impact factor: 5.285

Review 6. New twists on H2A.Z: a histone variant with a controversial structural and functional past.

Authors: Deanna Dryhurst; Anita A Thambirajah; Juan Ausió
Journal: Biochem Cell Biol Date: 2004-08 Impact factor: 3.626

7. Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange.

Authors: Wei-Hua Wu; Samar Alami; Edward Luk; Chwen-Huey Wu; Subhojit Sen; Gaku Mizuguchi; Debbie Wei; Carl Wu
Journal: Nat Struct Mol Biol Date: 2005-11-20 Impact factor: 15.369

8. A mammalian chromatin remodeling complex with similarities to the yeast INO80 complex.

Authors: Jingji Jin; Yong Cai; Tingting Yao; Aaron J Gottschalk; Laurence Florens; Selene K Swanson; José L Gutiérrez; Michael K Coleman; Jerry L Workman; Arcady Mushegian; Michael P Washburn; Ronald C Conaway; Joan Weliky Conaway
Journal: J Biol Chem Date: 2005-10-17 Impact factor: 5.157

9. Direct physical and functional interaction of the NuA4 complex components Yaf9p and Swc4p.

Authors: Claudia B Bittner; Deniz T Zeisig; Bernd B Zeisig; Robert K Slany
Journal: Eukaryot Cell Date: 2004-08

10. Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning.

Authors: Benoît Guillemette; Alain R Bataille; Nicolas Gévry; Maryse Adam; Mathieu Blanchette; François Robert; Luc Gaudreau
Journal: PLoS Biol Date: 2005-11-01 Impact factor: 8.029

43 in total

1. Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses.

Authors: Joshua M Gilmore; Mihaela E Sardiu; Swaminathan Venkatesh; Brent Stutzman; Allison Peak; Chris W Seidel; Jerry L Workman; Laurence Florens; Michael P Washburn
Journal: Mol Cell Proteomics Date: 2011-12-22 Impact factor: 5.911

2. The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor.

Authors: Maheshi Udugama; Abdellah Sabri; Blaine Bartholomew
Journal: Mol Cell Biol Date: 2010-12-06 Impact factor: 4.272

Review 3. Chromatin remodeling and cancer, Part II: ATP-dependent chromatin remodeling.

Authors: Gang G Wang; C David Allis; Ping Chi
Journal: Trends Mol Med Date: 2007-09-05 Impact factor: 11.951

Review 4. Chromatin and DNA replication.

Authors: David M MacAlpine; Geneviève Almouzni
Journal: Cold Spring Harb Perspect Biol Date: 2013-08-01 Impact factor: 10.005

Review 5. Pioneer factors and ATP-dependent chromatin remodeling factors interact dynamically: A new perspective: Multiple transcription factors can effect chromatin pioneer functions through dynamic interactions with ATP-dependent chromatin remodeling factors.

Authors: Erin E Swinstead; Ville Paakinaho; Diego M Presman; Gordon L Hager
Journal: Bioessays Date: 2016-09-16 Impact factor: 4.345

6. Histone octamer trans-transfer: a signature mechanism of ATP-dependent chromatin remodelling unravelled in wheat nuclear extract.

Authors: Vishal V Raut; Shashibhal M Pandey; Jayashree K Sainis
Journal: Ann Bot Date: 2011-09-06 Impact factor: 4.357