Literature DB >> 12796302

Dyskinetoplastic Trypanosoma brucei contains functional editing complexes.

Gonzalo J Domingo1, Setareh S Palazzo, Bingbing Wang, Brian Pannicucci, Reza Salavati, Kenneth D Stuart.   

Abstract

Mitochondrial pre-mRNAs undergo posttranscriptional RNA editing as directed by small guide RNAs (gRNAs) to produce functional mRNAs in kinetoplastid protozoa. The pre-mRNAs and gRNAs are encoded in the maxicircle and minicircle components, respectively, of the kinetoplastid mitochondrial DNA (kDNA), and editing is catalyzed by a multienzyme protein complex. Trypanosoma evansi AnTat3/3, which lacks maxicircles but retains a single class of minicircles, and a dyskinetoplastic mutant of Trypanosoma brucei EATRO164, which is devoid of kDNA, were both shown to retain genes and proteins for the editing complex. The proteins are present in complexes that immunoprecipitate and sediment indistinguishably from wild-type complexes. The complexes catalyze precleaved insertion and deletion editing as well as full-round deletion editing in vitro. Thus, mutants which lack the natural substrates for RNA editing and all or most gRNAs retain editing complexes that contain the four primary catalytic activities of editing and function in editing, at least in vitro. Therefore neither pre-mRNA nor gRNA is required to form functional RNA-editing complexes.

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Year:  2003        PMID: 12796302      PMCID: PMC161453          DOI: 10.1128/EC.2.3.569-577.2003

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  45 in total

1.  Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

Authors:  J Cruz-Reyes; A Zhelonkina; L Rusche; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  Import of a constitutively expressed protein into mitochondria from procyclic and bloodstream forms of Trypanosoma brucei.

Authors:  K I Bertrand; S L Hajduk
Journal:  Mol Biochem Parasitol       Date:  2000-03-05       Impact factor: 1.759

3.  Composition and functional characterization of the yeast spliceosomal penta-snRNP.

Authors:  Scott W Stevens; Daniel E Ryan; Helen Y Ge; Roger E Moore; Mary K Young; Terry D Lee; John Abelson
Journal:  Mol Cell       Date:  2002-01       Impact factor: 17.970

4.  Four related proteins of the Trypanosoma brucei RNA editing complex.

Authors:  A K Panigrahi; A Schnaufer; N Carmean; R P Igo; S P Gygi; N L Ernst; S S Palazzo; D S Weston; R Aebersold; R Salavati; K D Stuart
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

5.  Metabolic compartmentation in African trypanosomes.

Authors:  C E Clayton; P Michels
Journal:  Parasitol Today       Date:  1996-12

6.  RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing.

Authors:  R Sabatini; S L Hajduk
Journal:  J Biol Chem       Date:  1995-03-31       Impact factor: 5.157

7.  Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties.

Authors:  R A Corell; L K Read; G R Riley; J K Nellissery; T E Allen; M L Kable; M D Wachal; S D Seiwert; P J Myler; K D Stuart
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

8.  Disruption of a gene encoding a novel mitochondrial DEAD-box protein in Trypanosoma brucei affects edited mRNAs.

Authors:  A Missel; A E Souza; G Nörskau; H U Göringer
Journal:  Mol Cell Biol       Date:  1997-09       Impact factor: 4.272

Review 9.  Kinetoplast DNA.

Authors:  P Borst; J H Hoeijmakers
Journal:  Plasmid       Date:  1979-01       Impact factor: 3.466

Review 10.  Natural and induced dyskinetoplastic trypanosomatids: how to live without mitochondrial DNA.

Authors:  Achim Schnaufer; Gonzalo J Domingo; Ken Stuart
Journal:  Int J Parasitol       Date:  2002-08       Impact factor: 3.981

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  17 in total

Review 1.  Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates.

Authors:  Julius Lukes; Hassan Hashimi; Alena Zíková
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

2.  The MRB1 complex functions in kinetoplastid RNA processing.

Authors:  Nathalie Acestor; Aswini K Panigrahi; Jason Carnes; Alena Zíková; Kenneth D Stuart
Journal:  RNA       Date:  2008-12-18       Impact factor: 4.942

3.  Kinetoplastid guide RNA biogenesis is dependent on subunits of the mitochondrial RNA binding complex 1 and mitochondrial RNA polymerase.

Authors:  Hassan Hashimi; Zdenka Cicová; Lucie Novotná; Yan-Zi Wen; Julius Lukes
Journal:  RNA       Date:  2009-02-18       Impact factor: 4.942

4.  TbMP44 is essential for RNA editing and structural integrity of the editosome in Trypanosoma brucei.

Authors:  Bingbing Wang; Nancy Lewis Ernst; Setareh S Palazzo; Aswini K Panigrahi; Reza Salavati; Kenneth Stuart
Journal:  Eukaryot Cell       Date:  2003-06

5.  Dynamics of mitochondrial RNA-binding protein complex in Trypanosoma brucei and its petite mutant under optimized immobilization conditions.

Authors:  Zhenqiu Huang; Sabine Kaltenbrunner; Eva Šimková; David Stanĕk; Julius Lukeš; Hassan Hashimi
Journal:  Eukaryot Cell       Date:  2014-07-25

6.  The F1-ATP synthase complex in bloodstream stage trypanosomes has an unusual and essential function.

Authors:  Achim Schnaufer; G Desmond Clark-Walker; Alodie G Steinberg; Ken Stuart
Journal:  EMBO J       Date:  2005-11-17       Impact factor: 11.598

7.  Naphthalene-based RNA editing inhibitor blocks RNA editing activities and editosome assembly in Trypanosoma brucei.

Authors:  Houtan Moshiri; Stéphane Acoca; Smriti Kala; Hamed Shateri Najafabadi; Hervé Hogues; Enrico Purisima; Reza Salavati
Journal:  J Biol Chem       Date:  2011-03-04       Impact factor: 5.157

Review 8.  Trypanosomes and the solution to a 50-year mitochondrial calcium mystery.

Authors:  Roberto Docampo; Julius Lukeš
Journal:  Trends Parasitol       Date:  2011-11-14

9.  The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei.

Authors:  Xuemin Guo; Nancy Lewis Ernst; Jason Carnes; Kenneth D Stuart
Journal:  PLoS One       Date:  2010-01-27       Impact factor: 3.240

10.  Complete cycles of bloodstream trypanosome RNA editing in vitro.

Authors:  Kari Halbig; Monica De Nova-Ocampo; Jorge Cruz-Reyes
Journal:  RNA       Date:  2004-06       Impact factor: 4.942

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