Literature DB >> 15146075

Complete cycles of bloodstream trypanosome RNA editing in vitro.

Kari Halbig1, Monica De Nova-Ocampo, Jorge Cruz-Reyes.   

Abstract

RNA editing in kinetoplastid protists is required for the maturation of mitochondrial pre-mRNAs and occurs by protein-catalyzed cycles of uridylate insertion and deletion. During the complex life cycle of Trypanosoma brucei this process is differentially regulated in the mammalian bloodstream and insect procyclic stages. Complementary guide RNAs (gRNAs) direct editing, but the abundance of these transcripts is not developmentally controlled. The establishment of in vitro systems that recreate efficient RNA editing in bloodstream T. brucei would be valuable for mechanistic studies of regulation. Here we describe a robust in vitro system that reconstitutes full cycles of both U insertion and U deletion in bloodstream trypanosomes, and the first direct comparisons of the in vitro systems for strains of mammalian and insect stages.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15146075      PMCID: PMC1370583          DOI: 10.1261/rna.5157704

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  42 in total

1.  A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information.

Authors:  B Blum; N Bakalara; L Simpson
Journal:  Cell       Date:  1990-01-26       Impact factor: 41.582

2.  RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing.

Authors:  R Sabatini; S L Hajduk
Journal:  J Biol Chem       Date:  1995-03-31       Impact factor: 5.157

3.  RNA editing: transfer of genetic information from gRNA to precursor mRNA in vitro.

Authors:  S D Seiwert; K Stuart
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

4.  Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties.

Authors:  R A Corell; L K Read; G R Riley; J K Nellissery; T E Allen; M L Kable; M D Wachal; S D Seiwert; P J Myler; K D Stuart
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

5.  Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing.

Authors:  S D Seiwert; S Heidmann; K Stuart
Journal:  Cell       Date:  1996-03-22       Impact factor: 41.582

Review 6.  Developmental regulation of mitochondrial biogenesis in Trypanosoma brucei.

Authors:  J W Priest; S L Hajduk
Journal:  J Bioenerg Biomembr       Date:  1994-04       Impact factor: 2.945

7.  Kinetoplastid RNA editing: in vitro formation of cytochrome b gRNA-mRNA chimeras from synthetic substrate RNAs.

Authors:  M E Harris; S L Hajduk
Journal:  Cell       Date:  1992-03-20       Impact factor: 41.582

8.  Trypanosoma brucei mitochondrial ribosomal RNA synthesis, processing and developmentally regulated expression.

Authors:  E F Michelotti; M E Harris; B Adler; A F Torri; S L Hajduk
Journal:  Mol Biochem Parasitol       Date:  1992-08       Impact factor: 1.759

9.  Developmental regulation of RNA editing and polyadenylation in four life cycle stages of Trypanosoma congolense.

Authors:  L K Read; K A Stankey; W R Fish; A M Muthiani; K Stuart
Journal:  Mol Biochem Parasitol       Date:  1994-12       Impact factor: 1.759

10.  Native mRNA editing complexes from Trypanosoma brucei mitochondria.

Authors:  V W Pollard; M E Harris; S L Hajduk
Journal:  EMBO J       Date:  1992-12       Impact factor: 11.598

View more
  6 in total

Review 1.  Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates.

Authors:  Julius Lukes; Hassan Hashimi; Alena Zíková
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

2.  RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei.

Authors:  Anastasia Sacharidou; Catherine Cifuentes-Rojas; Kari Halbig; Alfredo Hernandez; Lawrence J Dangott; Monica De Nova-Ocampo; Jorge Cruz-Reyes
Journal:  RNA       Date:  2006-05-11       Impact factor: 4.942

3.  RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction.

Authors:  Melissa M Miller; Kari Halbig; Jorge Cruz-Reyes; Laurie K Read
Journal:  RNA       Date:  2006-05-11       Impact factor: 4.942

4.  Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei.

Authors:  Bhaskara Reddy Madina; Gokulan Kuppan; Ajay A Vashisht; Yu-He Liang; Kurtis M Downey; James A Wohlschlegel; Xinhua Ji; Sing-Hoi Sze; James C Sacchettini; Laurie K Read; Jorge Cruz-Reyes
Journal:  RNA       Date:  2011-08-02       Impact factor: 4.942

5.  Mitochondrial and nucleolar localization of cysteine desulfurase Nfs and the scaffold protein Isu in Trypanosoma brucei.

Authors:  Julie Kovárová; Eva Horáková; Piya Changmai; Marie Vancová; Julius Lukeš
Journal:  Eukaryot Cell       Date:  2013-11-15

6.  A Protein Complex Map of Trypanosoma brucei.

Authors:  Vahid H Gazestani; Najmeh Nikpour; Vaibhav Mehta; Hamed S Najafabadi; Houtan Moshiri; Armando Jardim; Reza Salavati
Journal:  PLoS Negl Trop Dis       Date:  2016-03-18
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.