Literature DB >> 12769291

Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species.

J S Heslop-Harrison1, Andrea Brandes, Trude Schwarzacher.   

Abstract

Despite their common function, centromeric DNA sequences are not conserved between organisms. Most centromeres of animals and plants so far investigated have now been shown to consist of large blocks of tandemly repeated satellite sequences that are embedded in recombination-deficient heterochromatic regions. This central domain of satellite sequences that is postulated to mediate spindle attachment is surrounded by pericentromeric sequences incorporating various classes of repetitive sequences often including retroelements. The centromeric satellite DNA sequences are amongst the most rapidly evolving sequences and pose some fundamental problems of maintaining function. In this overview, we will discuss work on centromeric repetitive sequences in Arabidopsis thaliana and its relatives, and highlight some of the common features that are emerging when analysing closely related species.

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Year:  2003        PMID: 12769291     DOI: 10.1023/a:1022998709969

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  54 in total

1.  Centromeric heterochromatin in the cattle rob(1;29) translocation: alpha-satellite I sequences, in-situ MspI digestion patterns, chromomycin staining and C-bands.

Authors:  R Chaves; J S Heslop-Harrsion; H Guedes-Pinto
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

Review 2.  Deviant nucleosomes: the functional specialization of chromatin.

Authors:  A P Wolffe; D Pruss
Journal:  Trends Genet       Date:  1996-02       Impact factor: 11.639

3.  Comparative analysis of the chromosomal and genomic organization of Ty1-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms.

Authors:  A Brandes; J S Heslop-Harrison; A Kamm; S Kubis; R L Doudrick; T Schmidt
Journal:  Plant Mol Biol       Date:  1997-01       Impact factor: 4.076

Review 4.  Mammalian artificial chromosomes and chromosome transgenics.

Authors:  C Huxley
Journal:  Trends Genet       Date:  1997-09       Impact factor: 11.639

Review 5.  Centromeres of budding and fission yeasts.

Authors:  L Clarke
Journal:  Trends Genet       Date:  1990-05       Impact factor: 11.639

6.  Genetic definition and sequence analysis of Arabidopsis centromeres.

Authors:  G P Copenhaver; K Nickel; T Kuromori; M I Benito; S Kaul; X Lin; M Bevan; G Murphy; B Harris; L D Parnell; W R McCombie; R A Martienssen; M Marra; D Preuss
Journal:  Science       Date:  1999-12-24       Impact factor: 47.728

7.  A tandem repetitive sequence located in the centromeric region of common wheat (Triticum aestivum) chromosomes.

Authors:  M Kishii; K Nagaki; H Tsujimoto
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

8.  Analysis of centromeric DNA in the fission yeast Schizosaccharomyces pombe.

Authors:  L Clarke; H Amstutz; B Fishel; J Carbon
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

9.  Molecular and cytological characterization of repetitive DNA sequences in Brassica.

Authors:  M Iwabuchi; K Itoh; K Shimamoto
Journal:  Theor Appl Genet       Date:  1991-03       Impact factor: 5.699

10.  Molecular and physical organization of highly repetitive, undermethylated DNA from Pennisetum glaucum.

Authors:  A Kamm; T Schmidt; J S Heslop-Harrison
Journal:  Mol Gen Genet       Date:  1994-08-15
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  27 in total

1.  Progress and Promise in using Arabidopsis to Study Adaptation, Divergence, and Speciation.

Authors:  Ben Hunter; Kirsten Bomblies
Journal:  Arabidopsis Book       Date:  2010-09-29

Review 2.  Transcription of tandemly repetitive DNA: functional roles.

Authors:  Maria Assunta Biscotti; Adriana Canapa; Mariko Forconi; Ettore Olmo; Marco Barucca
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

3.  Exact tandem repeats analyzer (E-TRA): a new program for DNA sequence mining.

Authors:  Mehmet Karaca; Mehmet Bilgen; A Naci Onus; Ayse Gul Ince; Safinaz Y Elmasulu
Journal:  J Genet       Date:  2005-04       Impact factor: 1.166

4.  Centromere positioning and dynamics in living Arabidopsis plants.

Authors:  Yuda Fang; David L Spector
Journal:  Mol Biol Cell       Date:  2005-09-29       Impact factor: 4.138

5.  Low rates of homogenization of the DBC-150 satellite DNA family restricted to a single pair of microchromosomes in species from the Drosophila buzzatii cluster.

Authors:  Gustavo C S Kuhn; Fernando F Franco; Maura H Manfrin; Orlando Moreira-Filho; Fabio M Sene
Journal:  Chromosome Res       Date:  2007-05-15       Impact factor: 5.239

6.  Sequence analysis, chromosomal distribution and long-range organization show that rapid turnover of new and old pBuM satellite DNA repeats leads to different patterns of variation in seven species of the Drosophila buzzatii cluster.

Authors:  Gustavo C S Kuhn; Fabio M Sene; Orlando Moreira-Filho; Trude Schwarzacher; John S Heslop-Harrison
Journal:  Chromosome Res       Date:  2008-02-11       Impact factor: 5.239

7.  A novel satellite DNA isolated in Pecten jacobaeus shows high sequence similarity among molluscs.

Authors:  Agnese Petraccioli; Gaetano Odierna; Teresa Capriglione; Marco Barucca; Mariko Forconi; Ettore Olmo; Maria Assunta Biscotti
Journal:  Mol Genet Genomics       Date:  2015-04-02       Impact factor: 3.291

8.  Evolutionary dynamics of an at-rich satellite DNA and its contribution to karyotype differentiation in wild diploid Arachis species.

Authors:  Sergio Sebastián Samoluk; Germán Robledo; David Bertioli; José Guillermo Seijo
Journal:  Mol Genet Genomics       Date:  2016-11-12       Impact factor: 3.291

9.  Satellite repeats in the functional centromere and pericentromeric heterochromatin of Medicago truncatula.

Authors:  Olga Kulikova; René Geurts; Monique Lamine; Dong-Jin Kim; Douglas R Cook; Jack Leunissen; Hans de Jong; Bruce A Roe; Ton Bisseling
Journal:  Chromosoma       Date:  2004-10-06       Impact factor: 4.316

10.  Chromosomal distribution and evolution of abundant retrotransposons in plants: gypsy elements in diploid and polyploid Brachiaria forage grasses.

Authors:  Fabíola Carvalho Santos; Romain Guyot; Cacilda Borges do Valle; Lucimara Chiari; Vânia Helena Techio; Pat Heslop-Harrison; André Luís Laforga Vanzela
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

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