Literature DB >> 10617454

Genetic definition and sequence analysis of Arabidopsis centromeres.

G P Copenhaver1, K Nickel, T Kuromori, M I Benito, S Kaul, X Lin, M Bevan, G Murphy, B Harris, L D Parnell, W R McCombie, R A Martienssen, M Marra, D Preuss.   

Abstract

High-precision genetic mapping was used to define the regions that contain centromere functions on each natural chromosome in Arabidopsis thaliana. These regions exhibited dramatic recombinational repression and contained complex DNA surrounding large arrays of 180-base pair repeats. Unexpectedly, the DNA within the centromeres was not merely structural but also encoded several expressed genes. The regions flanking the centromeres were densely populated by repetitive elements yet experienced normal levels of recombination. The genetically defined centromeres were well conserved among Arabidopsis ecotypes but displayed limited sequence homology between different chromosomes, excluding repetitive DNA. This investigation provides a platform for dissecting the role of individual sequences in centromeres in higher eukaryotes.

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Year:  1999        PMID: 10617454     DOI: 10.1126/science.286.5449.2468

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  183 in total

1.  Functional dissection of the cis-acting sequences of the Arabidopsis transposable element Tag1 reveals dissimilar subterminal sequence and minimal spacing requirements for transposition.

Authors:  D Liu; A Mack; R Wang; M Galli; J Belk; N I Ketpura; N M Crawford
Journal:  Genetics       Date:  2001-02       Impact factor: 4.562

2.  Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats.

Authors:  R M Stupar; J W Lilly; C D Town; Z Cheng; S Kaul; C R Buell; J Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-17       Impact factor: 11.205

3.  Analysis of 5S rDNA arrays in Arabidopsis thaliana: physical mapping and chromosome-specific polymorphisms.

Authors:  C Cloix; S Tutois; O Mathieu; C Cuvillier; M C Espagnol; G Picard; S Tourmente
Journal:  Genome Res       Date:  2000-05       Impact factor: 9.043

Review 4.  Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.

Authors:  J S Heslop-Harrison
Journal:  Plant Cell       Date:  2000-05       Impact factor: 11.277

5.  Replication of heterochromatin and structure of polytene chromosomes.

Authors:  T J Leach; H L Chotkowski; M G Wotring; R L Dilwith; R L Glaser
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

Review 6.  Comparative sequence analysis of plant nuclear genomes:m microcolinearity and its many exceptions.

Authors:  J L Bennetzen
Journal:  Plant Cell       Date:  2000-07       Impact factor: 11.277

7.  A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion.

Authors:  K Shirasu; A H Schulman; T Lahaye; P Schulze-Lefert
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

8.  Endogenous targets of transcriptional gene silencing in Arabidopsis.

Authors:  A Steimer; P Amedeo; K Afsar; P Fransz; O Mittelsten Scheid; J Paszkowski
Journal:  Plant Cell       Date:  2000-07       Impact factor: 11.277

9.  Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude.

Authors:  Huihua Fu; Zhenwei Zheng; Hugo K Dooner
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-15       Impact factor: 11.205

10.  Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome.

Authors:  Carène Rizzon; Gabriel Marais; Manolo Gouy; Christian Biémont
Journal:  Genome Res       Date:  2002-03       Impact factor: 9.043

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