Literature DB >> 12761392

A wheat germ cell-free system is a novel way to screen protein folding and function.

Eugene Hayato Morita1, Tatsuya Sawasaki, Rikou Tanaka, Yaeta Endo, Toshiyuki Kohno.   

Abstract

For high-throughput protein structural analysis, it is indispensable to develop a reliable protein overexpression system. Although many protein overexpression systems, such as that involving Escherichia coli cells, have been developed, the number of overexpressed proteins showing the same biological activities as those of the native proteins is limited. A novel wheat germ cell-free protein synthesis system was developed recently, and most of the proteins functioning in solution were synthesized as soluble forms. This suggests the applicability of this protein synthesis method to determination of the solution structures of functional proteins. To examine this possibility, we have synthesized two (15)N-labeled proteins and obtained (1)H-(15)N HSQC spectra for them. The structural analysis of these proteins has already progressed with an E. coli overexpression system, and (1)H-(15)N HSQC spectra for biologically active proteins have already been obtained. Comparing the spectra, we have shown that proteins synthesized with a wheat germ cell-free system have the proper protein folding and enough biological activity. This is the first experimental evidence of the applicability of the wheat germ cell-free protein synthesis system to high-throughput protein structural analysis.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12761392      PMCID: PMC2323893          DOI: 10.1110/ps.0241203

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  16 in total

1.  A new class of enzyme acting on damaged ribosomes: ribosomal RNA apurinic site specific lyase found in wheat germ.

Authors:  T Ogasawara; T Sawasaki; R Morishita; A Ozawa; K Madin; Y Endo
Journal:  EMBO J       Date:  1999-11-15       Impact factor: 11.598

2.  Protein engineering by expressed protein ligation.

Authors:  U K Blaschke; J Silberstein; T W Muir
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

3.  Cell-free translation reconstituted with purified components.

Authors:  Y Shimizu; A Inoue; Y Tomari; T Suzuki; T Yokogawa; K Nishikawa; T Ueda
Journal:  Nat Biotechnol       Date:  2001-08       Impact factor: 54.908

4.  NMR backbone assignments of the cold-regulated RNA-binding protein, rbpA1, in the cyanobacterium, anabaena variabilis M3.

Authors:  E H Morita; T Murakami; K Uegaki; T Yamazaki; N Sato; Y Kyogoku; H Hayashi
Journal:  J Biomol NMR       Date:  2000-08       Impact factor: 2.835

5.  A cell-free protein synthesis system for high-throughput proteomics.

Authors:  Tatsuya Sawasaki; Tomio Ogasawara; Ryo Morishita; Yaeta Endo
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-30       Impact factor: 11.205

6.  Rate of translation of natural mRNAs in an optimized in vitro system.

Authors:  M Y Pavlov; M Ehrenberg
Journal:  Arch Biochem Biophys       Date:  1996-04-01       Impact factor: 4.013

7.  Efficient translation of tobacco mosaic virus RNA and rabbit globin 9S RNA in a cell-free system from commercial wheat germ.

Authors:  B E Roberts; B M Paterson
Journal:  Proc Natl Acad Sci U S A       Date:  1973-08       Impact factor: 11.205

8.  Translational accuracy in vitro.

Authors:  C G Kurland
Journal:  Cell       Date:  1982-02       Impact factor: 41.582

9.  An NMR analysis of ubiquitin recognition by yeast ubiquitin hydrolase: evidence for novel substrate recognition by a cysteine protease.

Authors:  T Sakamoto; T Tanaka; Y Ito; S Rajesh; M Iwamoto-Sugai; Y Kodera; N Tsuchida; T Shibata; T Kohno
Journal:  Biochemistry       Date:  1999-09-07       Impact factor: 3.162

10.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

View more
  15 in total

1.  In vitro synthesis of fully functional EmrE, a multidrug transporter, and study of its oligomeric state.

Authors:  Yael Elbaz; Sonia Steiner-Mordoch; Tsafi Danieli; Shimon Schuldiner
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-30       Impact factor: 11.205

2.  NMR spectroscopic filtration of polypeptides and proteins in complex mixtures.

Authors:  Senapathy Rajagopalan; Charles Chow; Vinodhkumar Raghunathan; Charles G Fry; Silvia Cavagnero
Journal:  J Biomol NMR       Date:  2004-08       Impact factor: 2.835

3.  A novel way of amino acid-specific assignment in (1)H-(15)N HSQC spectra with a wheat germ cell-free protein synthesis system.

Authors:  Eugene Hayato Morita; Masato Shimizu; Tomio Ogasawara; Yaeta Endo; Rikou Tanaka; Toshiyuki Kohno
Journal:  J Biomol NMR       Date:  2004-09       Impact factor: 2.835

Review 4.  Cell-free protein synthesis: applications come of age.

Authors:  Erik D Carlson; Rui Gan; C Eric Hodgman; Michael C Jewett
Journal:  Biotechnol Adv       Date:  2011-10-08       Impact factor: 14.227

5.  NMR-based characterization of a refolding intermediate of beta2-microglobulin labeled using a wheat germ cell-free system.

Authors:  Atsushi Kameda; Eugene-Hayato Morita; Kazumasa Sakurai; Hironobu Naiki; Yuji Goto
Journal:  Protein Sci       Date:  2009-08       Impact factor: 6.725

6.  Practical cell-free protein synthesis system using purified wheat embryos.

Authors:  Kazuyuki Takai; Tatsuya Sawasaki; Yaeta Endo
Journal:  Nat Protoc       Date:  2010-01-21       Impact factor: 13.491

7.  An Escherichia coli-based cell-free system for large-scale production of functional mammalian membrane proteins suitable for X-ray crystallography.

Authors:  Tuan A Nguyen; Samantha S Lieu; Geoffrey Chang
Journal:  J Mol Microbiol Biotechnol       Date:  2010-02-17

8.  Stable-isotope labeling using an inducible viral infection system in suspension-cultured plant cells.

Authors:  Shinya Ohki; Koji Dohi; Atsushi Tamai; Makoto Takeuchi; Masashi Mori
Journal:  J Biomol NMR       Date:  2008-10-21       Impact factor: 2.835

9.  Development of a cell-free protein synthesis system for practical use.

Authors:  Yaeta Endo
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2021       Impact factor: 3.493

10.  Evaluation of approaches to identify the targets of cellular immunity on a proteome-wide scale.

Authors:  Fernanda C Cardoso; Joanne S Roddick; Penny Groves; Denise L Doolan
Journal:  PLoS One       Date:  2011-11-11       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.