Literature DB >> 12729723

An exotype alginate lyase in Sphingomonas sp. A1: overexpression in Escherichia coli, purification, and characterization of alginate lyase IV (A1-IV).

Osamu Miyake1, Wataru Hashimoto, Kousaku Murata.   

Abstract

Sphingomonas sp. A1 (strain A1) cells contain three kinds of endotype alginate lyases [A1-I, A1-II, and A1-III], all of which are formed from a common precursor through posttranslational processing. In addition to these lyases, another type of lyase (A1-IV) that acts on oligoalginates exists in the bacterium. A1-IV was overexpressed in Escherichia coli cells through control of its gene under the T7 promoter. The expression level of the enzyme in E. coli cells was 8.6U/L-culture, which was about 270-fold higher than that in strain A1 cells. The enzyme was purified to homogeneity through three steps with an activity yield of 10.9%. The optimal pH and temperature, thermal stability, and mode of action of the purified enzyme were similar to those of the native enzyme from strain A1 cells. A1-IV exolytically degraded oligoalginates, which were produced from alginate through the reaction of A1-I, A1-II, or A1-III, into monosaccharides, indicating that the cooperative actions of these four enzymes cause the complete depolymerization of alginate in strain A1 cells.

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Year:  2003        PMID: 12729723     DOI: 10.1016/s1046-5928(03)00018-4

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  21 in total

1.  Crystallization and preliminary X-ray analysis of an exotype alginate lyase Atu3025 from Agrobacterium tumefaciens strain C58, a member of polysaccharide lyase family 15.

Authors:  Akihito Ochiai; Masayuki Yamasaki; Bunzo Mikami; Wataru Hashimoto; Kousaku Murata
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-04-28

Review 2.  Bacterial supersystem for alginate import/metabolism and its environmental and bioenergy applications.

Authors:  Wataru Hashimoto; Shigeyuki Kawai; Kousaku Murata
Journal:  Bioeng Bugs       Date:  2009-10-14

3.  Cloning, Expression, and Biochemical Characterization of Two New Oligoalginate Lyases with Synergistic Degradation Capability.

Authors:  Shangyong Li; Linna Wang; Xuehong Chen; Wenwen Zhao; Mi Sun; Yantao Han
Journal:  Mar Biotechnol (NY)       Date:  2018-01-24       Impact factor: 3.619

4.  Cloning and characterization of a novel oligoalginate lyase from a newly isolated bacterium Sphingomonas sp. MJ-3.

Authors:  Hwan Hee Park; Natania Kam; Eun Yeol Lee; Hee Sook Kim
Journal:  Mar Biotechnol (NY)       Date:  2011-08-10       Impact factor: 3.619

5.  A polysaccharide lyase from Stenotrophomonas maltophilia with a unique, pH-regulated substrate specificity.

Authors:  Logan C MacDonald; Bryan W Berger
Journal:  J Biol Chem       Date:  2013-11-20       Impact factor: 5.157

6.  Cloning and characterization of the first polysaccharide lyase family 6 oligoalginate lyase from marine Shewanella sp. Kz7.

Authors:  Shangyong Li; Linna Wang; Feng Han; Qianhong Gong; Wengong Yu
Journal:  J Biochem       Date:  2015-07-30       Impact factor: 3.387

7.  Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase belonging to a novel polysaccharide lyase family.

Authors:  Naotake Konno; Kiyohiko Igarashi; Naoto Habu; Masahiro Samejima; Akira Isogai
Journal:  Appl Environ Microbiol       Date:  2008-10-31       Impact factor: 4.792

8.  Site-Directed Mutagenesis-Based Functional Analysis and Characterization of Endolytic Lyase Activity of N- and C-Terminal Domains of a Novel Oligoalginate Lyase from Sphingomonas sp. MJ-3 Possessing Exolytic Lyase Activity in the Intact Enzyme.

Authors:  Hae Sol Kim; Yu Jeong Chu; Chang-Ho Park; Eun Yeol Lee; Hee Sook Kim
Journal:  Mar Biotechnol (NY)       Date:  2015-09-05       Impact factor: 3.619

9.  The surface display of the alginate lyase on the cells of Yarrowia lipolytica for hydrolysis of alginate.

Authors:  Guanglei Liu; Lixi Yue; Zhe Chi; Wengong Yu; Zhenming Chi; Catherine Madzak
Journal:  Mar Biotechnol (NY)       Date:  2009-01-23       Impact factor: 3.619

10.  Characterization of AlgMsp, an alginate lyase from Microbulbifer sp. 6532A.

Authors:  Steven M Swift; Jeffrey W Hudgens; Ryan D Heselpoth; Patrick M Bales; Daniel C Nelson
Journal:  PLoS One       Date:  2014-11-19       Impact factor: 3.240

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