Literature DB >> 18978091

Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase belonging to a novel polysaccharide lyase family.

Naotake Konno1, Kiyohiko Igarashi, Naoto Habu, Masahiro Samejima, Akira Isogai.   

Abstract

The filamentous fungus Trichoderma reesei produces glucuronan lyase (TrGL) when it is grown on beta-(1-->4)-polyglucuronate (cellouronate) as a sole carbon source. The cDNA encoding TrGL was cloned, and the recombinant enzyme was heterologously expressed in Pichia pastoris. The cDNA of TrGL includes a 777-bp open reading frame encoding a 20-amino-acid signal peptide and the 238-amino-acid mature protein. The amino acid sequence showed no similarity to the amino acid sequences of previously described functional proteins, indicating that the enzyme should be classified in a novel polysaccharide lyase (PL) family. Recombinant TrGL catalyzed depolymerization of cellouronate endolytically by beta-elimination and was highly specific for cellouronate. The enzyme was most active at pH 6.5 and 50 degrees C, and its activity and thermostability increased in the presence of Ca2+, suggesting that its calcium dependence is similar to that of other PLs, such as pectate lyases.

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Year:  2008        PMID: 18978091      PMCID: PMC2612218          DOI: 10.1128/AEM.01749-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  34 in total

1.  Synergistic activity of endochitinase and exochitinase from Trichoderma atroviride (T. harzianum) against the pathogenic fungus (Venturia inaequalis) in transgenic apple plants.

Authors:  J P Bolar; J L Norelli; G E Harman; S K Brown; H S Aldwinckle
Journal:  Transgenic Res       Date:  2001-12       Impact factor: 2.788

2.  Production and characterization of recombinant Phanerochaete chrysosporium beta-glucosidase in the methylotrophic yeast Pichia pastoris.

Authors:  Rie Kawai; Makoto Yoshida; Tomomi Tani; Kiyohiko Igarashi; Tsuyoshi Ohira; Hiromichi Nagasawa; Masahiro Samejima
Journal:  Biosci Biotechnol Biochem       Date:  2003-01       Impact factor: 2.043

3.  Identification of amino acid residues critical for catalysis and stability in Aspergillus niger family 1 pectin lyase A.

Authors:  Paloma Sánchez-Torres; Jaap Visser; Jacques A E Benen
Journal:  Biochem J       Date:  2003-02-15       Impact factor: 3.857

4.  Cloning and characterization of multiple glycosyl hydrolase genes from Trichoderma virens.

Authors:  Dong-Jin Kim; Jong-Min Baek; Pedro Uribe; Charles M Kenerley; Douglas R Cook
Journal:  Curr Genet       Date:  2002-02-21       Impact factor: 3.886

5.  Mechanism of hyaluronan degradation by Streptococcus pneumoniae hyaluronate lyase. Structures of complexes with the substrate.

Authors:  Mark J Jedrzejas; Luciane V Mello; Bert L de Groot; Songlin Li
Journal:  J Biol Chem       Date:  2002-05-03       Impact factor: 5.157

6.  Characterization of Aspergillus niger pectate lyase A.

Authors:  J A Benen; H C Kester; L Parenicová; J Visser
Journal:  Biochemistry       Date:  2000-12-19       Impact factor: 3.162

7.  Algal-lytic activities encoded by Chlorella virus CVK2.

Authors:  I Sugimoto; S Hiramatsu; D Murakami; M Fujie; S Usami; T Yamada
Journal:  Virology       Date:  2000-11-10       Impact factor: 3.616

8.  Purification and properties of a glucuronan lyase from Sinorhizobium meliloti M5N1CS (NCIMB 40472).

Authors:  A Da Costa; P Michaud; E Petit; A Heyraud; P Colin-Morel; B Courtois; J Courtois
Journal:  Appl Environ Microbiol       Date:  2001-11       Impact factor: 4.792

9.  An exotype alginate lyase in Sphingomonas sp. A1: overexpression in Escherichia coli, purification, and characterization of alginate lyase IV (A1-IV).

Authors:  Osamu Miyake; Wataru Hashimoto; Kousaku Murata
Journal:  Protein Expr Purif       Date:  2003-05       Impact factor: 1.650

10.  Characterization and implications of Ca2+ binding to pectate lyase C.

Authors:  Steven R Herron; Robert D Scavetta; Michael Garrett; Margaret Legner; Frances Jurnak
Journal:  J Biol Chem       Date:  2003-01-22       Impact factor: 5.157

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  10 in total

1.  A polysaccharide lyase from Stenotrophomonas maltophilia with a unique, pH-regulated substrate specificity.

Authors:  Logan C MacDonald; Bryan W Berger
Journal:  J Biol Chem       Date:  2013-11-20       Impact factor: 5.157

2.  The gentio-oligosaccharide gentiobiose functions in the modulation of bud dormancy in the herbaceous perennial Gentiana.

Authors:  Hideyuki Takahashi; Tomohiro Imamura; Naotake Konno; Takumi Takeda; Kohei Fujita; Teruko Konishi; Masahiro Nishihara; Hirofumi Uchimiya
Journal:  Plant Cell       Date:  2014-10-17       Impact factor: 11.277

3.  Discovery of a Novel Glucuronan Lyase System in Trichoderma parareesei.

Authors:  Bo Pilgaard; Marlene Vuillemin; Line Munk; Jesper Holck; Sebastian Meier; Casper Wilkens; Anne S Meyer
Journal:  Appl Environ Microbiol       Date:  2021-10-27       Impact factor: 5.005

4.  Engineering broad-spectrum digestion of polyuronides from an exolytic polysaccharide lyase.

Authors:  Logan C MacDonald; Elizabeth B Weiler; Bryan W Berger
Journal:  Biotechnol Biofuels       Date:  2016-02-24       Impact factor: 6.040

5.  Draft Genome Sequence of Brevundimonas sp. Strain SH203, Producing Cellouronate (β-1,4-Linked Polyglucuronate) Lyase.

Authors:  Tomohiro Suzuki; Masako Kikuchi; Naotake Konno; Naoto Habu
Journal:  Genome Announc       Date:  2017-05-04

6.  Cellulose induced protein 1 (Cip1) from Trichoderma reesei enhances the enzymatic hydrolysis of pretreated lignocellulose.

Authors:  Hexue Jia; Wan Sun; Xuezhi Li; Jian Zhao
Journal:  Microb Cell Fact       Date:  2021-07-19       Impact factor: 5.328

7.  Re-annotation of the CAZy genes of Trichoderma reesei and transcription in the presence of lignocellulosic substrates.

Authors:  Mari Häkkinen; Mikko Arvas; Merja Oja; Nina Aro; Merja Penttilä; Markku Saloheimo; Tiina M Pakula
Journal:  Microb Cell Fact       Date:  2012-10-04       Impact factor: 5.328

8.  The crystal structure of the core domain of a cellulose induced protein (Cip1) from Hypocrea jecorina, at 1.5 Å resolution.

Authors:  Frida Jacobson; Saeid Karkehabadi; Henrik Hansson; Frits Goedegebuur; Louise Wallace; Colin Mitchinson; Kathleen Piens; Ingeborg Stals; Mats Sandgren
Journal:  PLoS One       Date:  2013-09-05       Impact factor: 3.240

9.  Analysis of a conserved cellulase transcriptional regulator reveals inducer-independent production of cellulolytic enzymes in Neurospora crassa.

Authors:  Samuel T Coradetti; Yi Xiong; N Louise Glass
Journal:  Microbiologyopen       Date:  2013-06-14       Impact factor: 3.139

Review 10.  Development of completely dispersed cellulose nanofibers.

Authors:  Akira Isogai
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2018       Impact factor: 3.493

  10 in total

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