Literature DB >> 12724409

A constitutive decay element promotes tumor necrosis factor alpha mRNA degradation via an AU-rich element-independent pathway.

Georg Stoecklin1, Min Lu, Bernd Rattenbacher, Christoph Moroni.   

Abstract

Tumor necrosis factor alpha (TNF-alpha) expression is regulated by transcriptional as well as posttranscriptional mechanisms, the latter including the control of mRNA decay through an AU-rich element (ARE) in the 3' untranslated region (UTR). Using two mutant cell lines deficient for ARE-mediated mRNA decay, we provide evidence for a second element, the constitutive decay element (CDE), which is also located in the 3' UTR of TNF-alpha. In stably transfected RAW 264.7 macrophages stimulated with lipopolysaccharide (LPS), the CDE continues to target a reporter transcript for rapid decay, whereas ARE-mediated decay is blocked. Similarly, the activation of p38 kinase and phosphatidylinositol 3-kinase in NIH 3T3 cells inhibits ARE-mediated but not CDE-mediated mRNA decay. The CDE was mapped to an 80-nucleotide (nt) segment downstream of the ARE, and point mutation analysis identified within the CDE a conserved sequence of 15 nt that is required for decay activity. We propose that the CDE represses TNF-alpha expression by maintaining the mRNA short-lived, thereby preventing excessive induction of TNF-alpha after LPS stimulation. Thus, CDE-mediated mRNA decay is likely to be an important mechanism limiting LPS-induced pathologic processes.

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Year:  2003        PMID: 12724409      PMCID: PMC164766          DOI: 10.1128/MCB.23.10.3506-3515.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  50 in total

1.  Evidence that tristetraprolin is a physiological regulator of granulocyte-macrophage colony-stimulating factor messenger RNA deadenylation and stability.

Authors:  E Carballo; W S Lai; P J Blackshear
Journal:  Blood       Date:  2000-03-15       Impact factor: 22.113

2.  A 32-kilodalton protein binds to AU-rich domains in the 3' untranslated regions of rapidly degraded mRNAs.

Authors:  E Vakalopoulou; J Schaack; T Shenk
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

3.  The protein-coding region of c-myc mRNA contains a sequence that specifies rapid mRNA turnover and induction by protein synthesis inhibitors.

Authors:  R Wisdom; W Lee
Journal:  Genes Dev       Date:  1991-02       Impact factor: 11.361

4.  Glucocorticoids suppress tumor necrosis factor-alpha expression by human monocytic THP-1 cells by suppressing transactivation through adjacent NF-kappa B and c-Jun-activating transcription factor-2 binding sites in the promoter.

Authors:  J H Steer; K M Kroeger; L J Abraham; D A Joyce
Journal:  J Biol Chem       Date:  2000-06-16       Impact factor: 5.157

5.  Somatic mRNA turnover mutants implicate tristetraprolin in the interleukin-3 mRNA degradation pathway.

Authors:  G Stoecklin; X F Ming; R Looser; C Moroni
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

6.  MAPKAP kinase 2 is essential for LPS-induced TNF-alpha biosynthesis.

Authors:  A Kotlyarov; A Neininger; C Schubert; R Eckert; C Birchmeier; H D Volk; M Gaestel
Journal:  Nat Cell Biol       Date:  1999-06       Impact factor: 28.824

7.  Interactions of CCCH zinc finger proteins with mRNA. Binding of tristetraprolin-related zinc finger proteins to Au-rich elements and destabilization of mRNA.

Authors:  W S Lai; E Carballo; J M Thorn; E A Kennington; P J Blackshear
Journal:  J Biol Chem       Date:  2000-06-09       Impact factor: 5.157

8.  Functional hierarchy of AUUUA motifs in mediating rapid interleukin-3 mRNA decay.

Authors:  G Stoecklin; S Hahn; C Moroni
Journal:  J Biol Chem       Date:  1994-11-18       Impact factor: 5.157

Review 9.  Tumor necrosis factor: a pleiotropic cytokine and therapeutic target.

Authors:  K J Tracey; A Cerami
Journal:  Annu Rev Med       Date:  1994       Impact factor: 13.739

10.  Complex regulation of tumor necrosis factor mRNA turnover in lipopolysaccharide-activated macrophages.

Authors:  J H Han; B Beutler; G Huez
Journal:  Biochim Biophys Acta       Date:  1991-08-27
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  46 in total

1.  mRNA degradation plays a significant role in the program of gene expression regulated by phosphatidylinositol 3-kinase signaling.

Authors:  Julie R Graham; Melissa C Hendershott; Jolyon Terragni; Geoffrey M Cooper
Journal:  Mol Cell Biol       Date:  2010-09-20       Impact factor: 4.272

2.  CARHSP1 is required for effective tumor necrosis factor alpha mRNA stabilization and localizes to processing bodies and exosomes.

Authors:  Jason R Pfeiffer; Bethany L McAvoy; Ryan E Fecteau; Kristen M Deleault; Seth A Brooks
Journal:  Mol Cell Biol       Date:  2010-11-15       Impact factor: 4.272

Review 3.  A systematic analysis of disease-associated variants in the 3' regulatory regions of human protein-coding genes II: the importance of mRNA secondary structure in assessing the functionality of 3' UTR variants.

Authors:  Jian-Min Chen; Claude Férec; David N Cooper
Journal:  Hum Genet       Date:  2006-06-29       Impact factor: 4.132

Review 4.  Regnase-1, a rapid response ribonuclease regulating inflammation and stress responses.

Authors:  Renfang Mao; Riyun Yang; Xia Chen; Edward W Harhaj; Xiaoying Wang; Yihui Fan
Journal:  Cell Mol Immunol       Date:  2017-02-13       Impact factor: 11.530

5.  Chaperone Hsp27, a novel subunit of AUF1 protein complexes, functions in AU-rich element-mediated mRNA decay.

Authors:  Kristina S Sinsimer; Frances M Gratacós; Anna M Knapinska; Jiebo Lu; Christopher D Krause; Alexandria V Wierzbowski; Lauren R Maher; Shannon Scrudato; Yonaira M Rivera; Swati Gupta; Danielle K Turrin; Mary Pauline De La Cruz; Sidney Pestka; Gary Brewer
Journal:  Mol Cell Biol       Date:  2008-06-23       Impact factor: 4.272

6.  IL-7 production in murine lymphatic endothelial cells and induction in the setting of peripheral lymphopenia.

Authors:  Corey N Miller; Dennis J Hartigan-O'Connor; Myeong Sup Lee; Grace Laidlaw; Ivo P Cornelissen; Mehrdad Matloubian; Shaun R Coughlin; Donald M McDonald; Joseph M McCune
Journal:  Int Immunol       Date:  2013-05-08       Impact factor: 4.823

7.  MicroRNAs distinguish translational from transcriptional silencing during endotoxin tolerance.

Authors:  Mohamed El Gazzar; Charles E McCall
Journal:  J Biol Chem       Date:  2010-04-30       Impact factor: 5.157

Review 8.  Post-transcriptional regulation of gene expression in innate immunity.

Authors:  Susan Carpenter; Emiliano P Ricci; Blandine C Mercier; Melissa J Moore; Katherine A Fitzgerald
Journal:  Nat Rev Immunol       Date:  2014-06       Impact factor: 53.106

9.  A GFP-based assay for rapid screening of compounds affecting ARE-dependent mRNA turnover.

Authors:  Don Benjamin; Marco Colombi; Christoph Moroni
Journal:  Nucleic Acids Res       Date:  2004-06-24       Impact factor: 16.971

10.  Tissue- and age-dependent expression of RNA-binding proteins that influence mRNA turnover and translation.

Authors:  Kiyoshi Masuda; Bernard Marasa; Jennifer L Martindale; Marc K Halushka; Myriam Gorospe
Journal:  Aging (Albany NY)       Date:  2009-07-26       Impact factor: 5.682

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