Literature DB >> 10805719

Somatic mRNA turnover mutants implicate tristetraprolin in the interleukin-3 mRNA degradation pathway.

G Stoecklin1, X F Ming, R Looser, C Moroni.   

Abstract

Control of mRNA stability is critical for expression of short-lived transcripts from cytokines and proto-oncogenes. Regulation involves an AU-rich element (ARE) in the 3' untranslated region (3'UTR) and cognate trans-acting factors thought to promote either degradation or stabilization of the mRNA. In this study we present a novel approach using somatic cell genetics designed to identify regulators of interleukin-3 (IL-3) mRNA turnover. Mutant cell lines were generated from diploid HT1080 cells transfected with a reporter construct containing green fluorescent protein (GFP) linked to the IL-3 3'UTR. GFP was expressed at low levels due to rapid decay of the mRNA. Following chemical mutagenesis and selection of GFP-overexpressing cells, we could isolate three mutant clones (slowA, slowB, and slowC) with a specific, trans-acting defect in IL-3 mRNA degradation, while the stability of IL-2 and tumor necrosis factor alpha reporter transcripts was not affected. Somatic cell fusion experiments revealed that the mutants are genetically recessive and form two complementation groups. Expression of the tristetraprolin gene in both groups led to reversion of the mutant phenotype, thereby linking this gene to the IL-3 mRNA degradation pathway. The genetic approach described here should allow identification of the defective functions by gene transfer and is also applicable to the study of other mRNA turnover pathways.

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Year:  2000        PMID: 10805719      PMCID: PMC85689          DOI: 10.1128/MCB.20.11.3753-3763.2000

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  49 in total

1.  Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs.

Authors:  X C Fan; J A Steitz
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

2.  RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein.

Authors:  S S Peng; C Y Chen; N Xu; A B Shyu
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

3.  Identification of HuR as a protein implicated in AUUUA-mediated mRNA decay.

Authors:  V E Myer; X C Fan; J A Steitz
Journal:  EMBO J       Date:  1997-04-15       Impact factor: 11.598

4.  The von Hippel-Lindau tumor suppressor protein is a component of an E3 ubiquitin-protein ligase activity.

Authors:  J Lisztwan; G Imbert; C Wirbelauer; M Gstaiger; W Krek
Journal:  Genes Dev       Date:  1999-07-15       Impact factor: 11.361

5.  Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element.

Authors:  P Loflin; C Y Chen; A B Shyu
Journal:  Genes Dev       Date:  1999-07-15       Impact factor: 11.361

6.  Evidence that tristetraprolin binds to AU-rich elements and promotes the deadenylation and destabilization of tumor necrosis factor alpha mRNA.

Authors:  W S Lai; E Carballo; J R Strum; E A Kennington; R S Phillips; P J Blackshear
Journal:  Mol Cell Biol       Date:  1999-06       Impact factor: 4.272

7.  Calcium-dependent and oncogenic IL-3 mRNA stabilization can be distinguished pharmacologically and by sequence requirements in the 3'UTR.

Authors:  A Wyss; C Moroni
Journal:  Growth Factors       Date:  2000       Impact factor: 2.511

8.  Feedback inhibition of macrophage tumor necrosis factor-alpha production by tristetraprolin.

Authors:  E Carballo; W S Lai; P J Blackshear
Journal:  Science       Date:  1998-08-14       Impact factor: 47.728

9.  Negative regulation of hypoxia-inducible genes by the von Hippel-Lindau protein.

Authors:  O Iliopoulos; A P Levy; C Jiang; W G Kaelin; M A Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

10.  c-jun N-terminal kinase is involved in AUUUA-mediated interleukin-3 mRNA turnover in mast cells.

Authors:  X F Ming; M Kaiser; C Moroni
Journal:  EMBO J       Date:  1998-10-15       Impact factor: 11.598

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  65 in total

1.  ARED: human AU-rich element-containing mRNA database reveals an unexpectedly diverse functional repertoire of encoded proteins.

Authors:  T Bakheet; M Frevel; B R Williams; W Greer; K S Khabar
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

Review 2.  MRNA stability and the control of gene expression: implications for human disease.

Authors:  Elysia M Hollams; Keith M Giles; Andrew M Thomson; Peter J Leedman
Journal:  Neurochem Res       Date:  2002-10       Impact factor: 3.996

Review 3.  The roles of TTP and BRF proteins in regulated mRNA decay.

Authors:  Sandhya Sanduja; Fernando F Blanco; Dan A Dixon
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

4.  Roles of AUF1 isoforms, HuR and BRF1 in ARE-dependent mRNA turnover studied by RNA interference.

Authors:  Ines Raineri; Daniel Wegmueller; Brigitte Gross; Ulrich Certa; Christoph Moroni
Journal:  Nucleic Acids Res       Date:  2004-02-19       Impact factor: 16.971

Review 5.  Inflammation: cytokines and RNA-based regulation.

Authors:  Deborah J Stumpo; Wi S Lai; Perry J Blackshear
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-05-06       Impact factor: 9.957

6.  The ARE-dependent mRNA-destabilizing activity of BRF1 is regulated by protein kinase B.

Authors:  Martin Schmidlin; Min Lu; Sabrina A Leuenberger; Georg Stoecklin; Michel Mallaun; Brigitte Gross; Roberto Gherzi; Daniel Hess; Brian A Hemmings; Christoph Moroni
Journal:  EMBO J       Date:  2004-11-11       Impact factor: 11.598

7.  Identification of RNA-binding proteins that regulate FGFR2 splicing through the use of sensitive and specific dual color fluorescence minigene assays.

Authors:  Emily A Newman; Stephanie J Muh; Ruben H Hovhannisyan; Claude C Warzecha; Richard B Jones; Wallace L McKeehan; Russ P Carstens
Journal:  RNA       Date:  2006-04-07       Impact factor: 4.942

Review 8.  Coordinate regulation of mRNA decay networks by GU-rich elements and CELF1.

Authors:  Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  Curr Opin Genet Dev       Date:  2011-04-13       Impact factor: 5.578

Review 9.  Tristetraprolin (TTP): interactions with mRNA and proteins, and current thoughts on mechanisms of action.

Authors:  Seth A Brooks; Perry J Blackshear
Journal:  Biochim Biophys Acta       Date:  2013-02-18

10.  A GFP-based assay for rapid screening of compounds affecting ARE-dependent mRNA turnover.

Authors:  Don Benjamin; Marco Colombi; Christoph Moroni
Journal:  Nucleic Acids Res       Date:  2004-06-24       Impact factor: 16.971

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