Literature DB >> 15263838

Protein crystallization in the structural genomics era.

Alexander McPherson1.   

Abstract

There are five broad areas where noteworthy advances have occurred in the field of macromolecular crystallization in the past 10 years, though some areas have seen the major part of those advances in only the last two years. This is largely a consequence of the international structural genomics initiative and its early results. The five areas are: (1) Physical studies and characterization of the protein crystallization process; (2) Development of new practical approaches and procedures; (3) The implementation of protein engineering by genetic means to enhance both purification and crystallization; (4) The creation of new screening conditions based on information and databases emerging from structural genomics; and (5) Development and implementation of automation, robotics, and mass screening of crystallization conditions using very small amounts of protein. A brief summary is provided here of the progress in the past few years and the influence of the structural genomics project.

Mesh:

Substances:

Year:  2004        PMID: 15263838     DOI: 10.1023/B:JSFG.0000029199.43875.92

Source DB:  PubMed          Journal:  J Struct Funct Genomics        ISSN: 1345-711X


  38 in total

1.  Phase Diagram of Colloidal Solutions.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-12-02       Impact factor: 9.161

2.  Atomic force microscopy applications in macromolecular crystallography.

Authors:  A McPherson; A J Malkin; Y G Kuznetsov; M Plomp
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-07-23

Review 3.  Membrane protein structural biology: the high throughput challenge.

Authors:  Patrick J Loll
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

Review 4.  Protein crystallization by capillary counterdiffusion for applied crystallographic structure determination.

Authors:  Joseph D Ng; José A Gavira; Juan M García-Ruíz
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

5.  Understanding salt or PEG induced attractive interactions to crystallize biological macromolecules.

Authors:  Annette Tardieu; Françoise Bonneté; Stéphanie Finet; Denis Vivarès
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-26

6.  Step bunching in a diffusion-controlled system: phase-shifting interferometry investigation of ferritin.

Authors:  Olga Gliko; Nicholas A Booth; Peter G Vekilov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-26

7.  Atomic force microscope.

Authors: 
Journal:  Phys Rev Lett       Date:  1986-03-03       Impact factor: 9.161

8.  Crystallographic studies on lactate dehydrogenase at-75 degrees C.

Authors:  D J Haas; M G Rossmann
Journal:  Acta Crystallogr B       Date:  1970-07-15       Impact factor: 2.266

9.  Crystallization of biological macromolecules using agarose gel.

Authors:  Christian Biertümpfel; Jérôme Basquin; Dietrich Suck; Claude Sauter
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-26

10.  Mechanisms of growth for protein and virus crystals.

Authors:  A J Malkin; T A Land; J J DeYoreo; A McPherson
Journal:  Nat Struct Biol       Date:  1995-11
View more
  9 in total

Review 1.  The impact of extremophiles on structural genomics (and vice versa).

Authors:  Francis E Jenney; Michael W W Adams
Journal:  Extremophiles       Date:  2007-06-13       Impact factor: 2.395

2.  Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold.

Authors:  Valentina Tereshko; Serdar Uysal; Akiko Koide; Katrina Margalef; Shohei Koide; Anthony A Kossiakoff
Journal:  Protein Sci       Date:  2008-04-29       Impact factor: 6.725

3.  Coverage of whole proteome by structural genomics observed through protein homology modeling database.

Authors:  Kei Yura; Akihiro Yamaguchi; Mitiko Go
Journal:  J Struct Funct Genomics       Date:  2006-12-05

Review 4.  Crystallization of membrane proteins by vapor diffusion.

Authors:  Jared A Delmar; Jani Reddy Bolla; Chih-Chia Su; Edward W Yu
Journal:  Methods Enzymol       Date:  2015-03-24       Impact factor: 1.600

5.  Crystallization and preliminary X-ray diffraction analysis of recombinant hepatitis E virus-like particle.

Authors:  Che-Yen Wang; Naoyuki Miyazaki; Tetsuo Yamashita; Akifumi Higashiura; Atsushi Nakagawa; Tian-Cheng Li; Naokazu Takeda; Li Xing; Erik Hjalmarsson; Claes Friberg; Der-Ming Liou; Yen-Jen Sung; Tomitake Tsukihara; Yoshiharu Matsuura; Tatsuo Miyamura; R Holland Cheng
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-03-29

6.  Sequence-based prediction of protein crystallization, purification and production propensity.

Authors:  Marcin J Mizianty; Lukasz Kurgan
Journal:  Bioinformatics       Date:  2011-07-01       Impact factor: 6.937

7.  Comparative modelling of protein structure and its impact on microbial cell factories.

Authors:  Nuria B Centeno; Joan Planas-Iglesias; Baldomero Oliva
Journal:  Microb Cell Fact       Date:  2005-06-30       Impact factor: 5.328

8.  Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint.

Authors:  Russell L Marsden; Tony A Lewis; Christine A Orengo
Journal:  BMC Bioinformatics       Date:  2007-03-09       Impact factor: 3.169

Review 9.  An overview of biological macromolecule crystallization.

Authors:  Irene Russo Krauss; Antonello Merlino; Alessandro Vergara; Filomena Sica
Journal:  Int J Mol Sci       Date:  2013-05-31       Impact factor: 5.923

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.