Literature DB >> 12649424

Denaturation and reassembly of chaperonin GroEL studied by solution X-ray scattering.

Munehito Arai1, Tomonao Inobe, Kosuke Maki, Teikichi Ikura, Hiroshi Kihara, Yoshiyuki Amemiya, Kunihiro Kuwajima.   

Abstract

We measured the denaturation and reassembly of Escherichia coli chaperonin GroEL using small-angle solution X-ray scattering, which is a powerful technique for studying the overall structure and assembly of a protein in solution. The results of the urea-induced unfolding transition show that GroEL partially dissociates in the presence of more than 2 M urea, cooperatively unfolds at around 3 M urea, and is in a monomeric random coil-like unfolded structure at more than 3.2 M urea. Attempted refolding of the unfolded GroEL monomer by a simple dilution procedure is not successful, leading to formation of aggregates. However, the presence of ammonium sulfate and MgADP allows the fully unfolded GroEL to refold into a structure with the same hydrodynamic dimension, within experimental error, as that of the native GroEL. Moreover, the X-ray scattering profiles of the GroEL thus refolded and the native GroEL are coincident with each other, showing that the refolded GroEL has the same structure and the molecular mass as the native GroEL. These results demonstrate that the fully unfolded GroEL monomer can refold and reassemble into the native tetradecameric structure in the presence of ammonium sulfate and MgADP without ATP hydrolysis and preexisting chaperones. Therefore, GroEL can, in principle, fold and assemble into the native structure according to the intrinsic characteristic of its polypeptide chain, although preexisting GroEL would be important when the GroEL folding takes place under in vivo conditions, in order to avoid misfolding and aggregation.

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Year:  2003        PMID: 12649424      PMCID: PMC2323844          DOI: 10.1110/ps.0233603

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  54 in total

1.  Synchronized domain-opening motion of GroEL is essential for communication between the two rings.

Authors:  K Shiseki; N Murai; F Motojima; T Hisabori; M Yoshida; H Taguchi
Journal:  J Biol Chem       Date:  2001-01-03       Impact factor: 5.157

2.  Excluded volume effects on the refolding and assembly of an oligomeric protein. GroEL, a case study.

Authors:  A Galan; B Sot; O Llorca; J L Carrascosa; J M Valpuesta; A Muga
Journal:  J Biol Chem       Date:  2001-01-12       Impact factor: 5.157

Review 3.  Changes in biomolecular conformation seen by small angle X-ray scattering.

Authors:  S Doniach
Journal:  Chem Rev       Date:  2001-06       Impact factor: 60.622

Review 4.  Assembly of chaperonin complexes.

Authors:  A R Kusmierczyk; J Martin
Journal:  Mol Biotechnol       Date:  2001-10       Impact factor: 2.695

Review 5.  Molecular chaperones in the cytosol: from nascent chain to folded protein.

Authors:  F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  Science       Date:  2002-03-08       Impact factor: 47.728

Review 6.  Folding of newly translated proteins in vivo: the role of molecular chaperones.

Authors:  J Frydman
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

7.  Nucleotide binding to the chaperonin GroEL: non-cooperative binding of ATP analogs and ADP, and cooperative effect of ATP.

Authors:  T Inobe; T Makio; E Takasu-Ishikawa; T P Terada; K Kuwajima
Journal:  Biochim Biophys Acta       Date:  2001-02-09

8.  Equilibrium and kinetics of the allosteric transition of GroEL studied by solution X-ray scattering and fluorescence spectroscopy.

Authors:  Tomonao Inobe; Munehito Arai; Masaharu Nakao; Kazuki Ito; Kiyoto Kamagata; Tadashi Makio; Yoshiyuki Amemiya; Hiroshi Kihara; Kunihiro Kuwajima
Journal:  J Mol Biol       Date:  2003-03-14       Impact factor: 5.469

9.  Fast compaction of alpha-lactalbumin during folding studied by stopped-flow X-ray scattering.

Authors:  Munehito Arai; Kazuki Ito; Tomonao Inobe; Masaharu Nakao; Kosuke Maki; Kiyoto Kamagata; Hiroshi Kihara; Yoshiyuki Amemiya; Kunihiro Kuwajima
Journal:  J Mol Biol       Date:  2002-08-02       Impact factor: 5.469

Review 10.  Protein denaturation.

Authors:  C Tanford
Journal:  Adv Protein Chem       Date:  1968
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  6 in total

1.  Random-coil behavior and the dimensions of chemically unfolded proteins.

Authors:  Jonathan E Kohn; Ian S Millett; Jaby Jacob; Bojan Zagrovic; Thomas M Dillon; Nikolina Cingel; Robin S Dothager; Soenke Seifert; P Thiyagarajan; Tobin R Sosnick; M Zahid Hasan; Vijay S Pande; Ingo Ruczinski; Sebastian Doniach; Kevin W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

2.  Disassembly/reassembly strategy for the production of highly pure GroEL, a tetradecameric supramolecular machine, suitable for quantitative NMR, EPR and mutational studies.

Authors:  Marielle A Wälti; G Marius Clore
Journal:  Protein Expr Purif       Date:  2017-09-22       Impact factor: 1.650

Review 3.  Unified understanding of folding and binding mechanisms of globular and intrinsically disordered proteins.

Authors:  Munehito Arai
Journal:  Biophys Rev       Date:  2018-01-06

4.  Protein-caged zinc porphyrin as a carbonic anhydrase mimic for carbon dioxide capture.

Authors:  Haixia Chi; Han Chen; Kai Gong; Xiaoqiang Wang; Youming Zhang
Journal:  Sci Rep       Date:  2020-11-11       Impact factor: 4.379

5.  Human Hsp60 with its mitochondrial import signal occurs in solution as heptamers and tetradecamers remarkably stable over a wide range of concentrations.

Authors:  Silvia Vilasi; Rita Carrotta; Maria Rosalia Mangione; Claudia Campanella; Fabio Librizzi; Loredana Randazzo; Vincenzo Martorana; Antonella Marino Gammazza; Maria Grazia Ortore; Annalisa Vilasi; Gabriella Pocsfalvi; Giosalba Burgio; Davide Corona; Antonio Palumbo Piccionello; Giovanni Zummo; Donatella Bulone; Everly Conway de Macario; Alberto J L Macario; Pier Luigi San Biagio; Francesco Cappello
Journal:  PLoS One       Date:  2014-05-15       Impact factor: 3.240

6.  Chaperonin GroEL reassembly: an effect of protein ligands and solvent composition.

Authors:  Nataliya Ryabova; Victor Marchenkov; Nina Kotova; Gennady Semisotnov
Journal:  Biomolecules       Date:  2014-04-22
  6 in total

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