Literature DB >> 12139938

Fast compaction of alpha-lactalbumin during folding studied by stopped-flow X-ray scattering.

Munehito Arai1, Kazuki Ito, Tomonao Inobe, Masaharu Nakao, Kosuke Maki, Kiyoto Kamagata, Hiroshi Kihara, Yoshiyuki Amemiya, Kunihiro Kuwajima.   

Abstract

To monitor the fast compaction process during protein folding, we have used a stopped-flow small-angle X-ray scattering technique combined with a two-dimensional charge-coupled device-based X-ray detector that makes it possible to improve the signal-to-noise ratio of data dramatically, and measured the kinetic refolding reaction of alpha-lactalbumin. The results clearly show that the radius of gyration and the overall shape of the kinetic folding intermediate of alpha-lactalbumin are the same as those of the molten globule state observed at equilibrium. Thus, the identity between the kinetic folding intermediate and the equilibrium molten globule state is firmly established. The present results also suggest that the folding intermediate is more hydrated than the native state and that the hydrated water molecules are dehydrated when specific side-chain packing is formed during the change from the molten globule to the native state.

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Year:  2002        PMID: 12139938     DOI: 10.1016/s0022-2836(02)00566-1

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  21 in total

1.  Collapse and search dynamics of apomyoglobin folding revealed by submillisecond observations of alpha-helical content and compactness.

Authors:  Takanori Uzawa; Shuji Akiyama; Tetsunari Kimura; Satoshi Takahashi; Koichiro Ishimori; Isao Morishima; Tetsuro Fujisawa
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-07       Impact factor: 11.205

2.  Denaturation and reassembly of chaperonin GroEL studied by solution X-ray scattering.

Authors:  Munehito Arai; Tomonao Inobe; Kosuke Maki; Teikichi Ikura; Hiroshi Kihara; Yoshiyuki Amemiya; Kunihiro Kuwajima
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

3.  Structures during binding of cAMP receptor to promoter DNA: promoter search slowed by non-specific sites.

Authors:  Dietmar Porschke
Journal:  Eur Biophys J       Date:  2012-02-24       Impact factor: 1.733

4.  Specific collapse followed by slow hydrogen-bond formation of beta-sheet in the folding of single-chain monellin.

Authors:  Tetsunari Kimura; Takanori Uzawa; Koichiro Ishimori; Isao Morishima; Satoshi Takahashi; Takashi Konno; Shuji Akiyama; Tetsuro Fujisawa
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-14       Impact factor: 11.205

5.  Asymmetry of the GroEL-GroES complex under physiological conditions as revealed by small-angle x-ray scattering.

Authors:  Tomonao Inobe; Kazunobu Takahashi; Kosuke Maki; Sawako Enoki; Kiyoto Kamagata; Akio Kadooka; Munehito Arai; Kunihiro Kuwajima
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

6.  Sequential action of ATP-dependent subunit conformational change and interaction between helical protrusions in the closure of the built-in lid of group II chaperonins.

Authors:  Taro Kanzaki; Ryo Iizuka; Kazunobu Takahashi; Kosuke Maki; Rie Masuda; Muhamad Sahlan; Hugo Yébenes; José M Valpuesta; Toshihiko Oka; Masahiro Furutani; Noriyuki Ishii; Kunihiro Kuwajima; Masafumi Yohda
Journal:  J Biol Chem       Date:  2008-10-13       Impact factor: 5.157

7.  Hydrated and dehydrated tertiary interactions--opening and closing--of a four-helix bundle peptide.

Authors:  Martin Lignell; Lotta T Tegler; Hans-Christian Becker
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

8.  Structural and thermodynamic characterization of T4 lysozyme mutants and the contribution of internal cavities to pressure denaturation.

Authors:  Nozomi Ando; Buz Barstow; Walter A Baase; Andrew Fields; Brian W Matthews; Sol M Gruner
Journal:  Biochemistry       Date:  2008-09-25       Impact factor: 3.162

9.  Interrupted hydrogen/deuterium exchange reveals the stable core of the remarkably helical molten globule of alpha-beta parallel protein flavodoxin.

Authors:  Sanne M Nabuurs; Carlo P M van Mierlo
Journal:  J Biol Chem       Date:  2009-12-03       Impact factor: 5.157

10.  Transient helical structure during PI3K and Fyn SH3 domain folding.

Authors:  Yoshitaka Matsumura; Masaji Shinjo; Seung Joong Kim; Nobuyuki Okishio; Martin Gruebele; Hiroshi Kihara
Journal:  J Phys Chem B       Date:  2013-04-18       Impact factor: 2.991

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