Literature DB >> 12591941

Molecular mechanism of recruitment of TFIIF- associating RNA polymerase C-terminal domain phosphatase (FCP1) by transcription factor IIF.

Katsuhiko Kamada1, Robert G Roeder, Stephen K Burley.   

Abstract

After mRNA transcription termination in eukaryotes, the hyperphosphorylated form of RNA polymerase II (pol II0) must be recycled by TFIIF-associating C-terminal domain phosphatase (FCP1), the phosphatase responsible for dephosphorylating the C-terminal domain of the largest polymerase subunit. Transcription factor (TF)-IIF stimulates the activity of FCP1, and the RNA polymerase II-associating protein 74 subunit of TFIIF forms a complex with FCP1 in both human and yeast. Here, we report a cocrystal structure of the winged-helix domain of human RNA polymerase II-associating protein 74 bound to the alpha-helical C terminus of human FCP1 (residues 944-961). These results illustrate the molecular mechanism by which TFIIF efficiently recruits FCP1 to the pol II transcription machinery for recycling of the polymerase.

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Year:  2003        PMID: 12591941      PMCID: PMC151334          DOI: 10.1073/pnas.262798199

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  A protein phosphatase functions to recycle RNA polymerase II.

Authors:  H Cho; T K Kim; H Mancebo; W S Lane; O Flores; D Reinberg
Journal:  Genes Dev       Date:  1999-06-15       Impact factor: 11.361

Review 2.  Winged helix proteins.

Authors:  K S Gajiwala; S K Burley
Journal:  Curr Opin Struct Biol       Date:  2000-02       Impact factor: 6.809

Review 3.  Control of elongation by RNA polymerase II.

Authors:  J W Conaway; A Shilatifard; A Dvir; R C Conaway
Journal:  Trends Biochem Sci       Date:  2000-08       Impact factor: 13.807

4.  Crystal structure of the C-terminal domain of the RAP74 subunit of human transcription factor IIF.

Authors:  K Kamada; J De Angelis; R G Roeder; S K Burley
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

5.  An unusual eukaryotic protein phosphatase required for transcription by RNA polymerase II and CTD dephosphorylation in S. cerevisiae.

Authors:  M S Kobor; J Archambault; W Lester; F C Holstege; O Gileadi; D B Jansma; E G Jennings; F Kouyoumdjian; A R Davidson; R A Young; J Greenblatt
Journal:  Mol Cell       Date:  1999-07       Impact factor: 17.970

6.  Novel dimerization fold of RAP30/RAP74 in human TFIIF at 1.7 A resolution.

Authors:  F Gaiser; S Tan; T J Richmond
Journal:  J Mol Biol       Date:  2000-10-06       Impact factor: 5.469

7.  Transcription-independent RNA polymerase II dephosphorylation by the FCP1 carboxy-terminal domain phosphatase in Xenopus laevis early embryos.

Authors:  B Palancade; M F Dubois; M E Dahmus; O Bensaude
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

8.  A motif shared by TFIIF and TFIIB mediates their interaction with the RNA polymerase II carboxy-terminal domain phosphatase Fcp1p in Saccharomyces cerevisiae.

Authors:  M S Kobor; L D Simon; J Omichinski; G Zhong; J Archambault; J Greenblatt
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

9.  Formation of a carboxy-terminal domain phosphatase (Fcp1)/TFIIF/RNA polymerase II (pol II) complex in Schizosaccharomyces pombe involves direct interaction between Fcp1 and the Rpb4 subunit of pol II.

Authors:  Makoto Kimura; Hisako Suzuki; Akira Ishihama
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

10.  Reconstitution of the transcription factor TFIIH: assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7.

Authors:  F Tirode; D Busso; F Coin; J M Egly
Journal:  Mol Cell       Date:  1999-01       Impact factor: 17.970

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  10 in total

Review 1.  Structure and mechanism of the RNA polymerase II transcription machinery.

Authors:  Steven Hahn
Journal:  Nat Struct Mol Biol       Date:  2004-05       Impact factor: 15.369

2.  Position of the general transcription factor TFIIF within the RNA polymerase II transcription preinitiation complex.

Authors:  Jesse Eichner; Hung-Ta Chen; Linda Warfield; Steven Hahn
Journal:  EMBO J       Date:  2009-12-24       Impact factor: 11.598

Review 3.  Structural basis of transcription initiation by RNA polymerase II.

Authors:  Sarah Sainsbury; Carrie Bernecky; Patrick Cramer
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-18       Impact factor: 94.444

4.  NMR structure of a complex containing the TFIIF subunit RAP74 and the RNA polymerase II carboxyl-terminal domain phosphatase FCP1.

Authors:  Bao D Nguyen; Karen L Abbott; Krzysztof Potempa; Michael S Kobor; Jacques Archambault; Jack Greenblatt; Pascale Legault; James G Omichinski
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-05       Impact factor: 11.205

5.  The structure of the mammalian RNase H2 complex provides insight into RNA.NA hybrid processing to prevent immune dysfunction.

Authors:  Nadine M Shaban; Scott Harvey; Fred W Perrino; Thomas Hollis
Journal:  J Biol Chem       Date:  2009-11-18       Impact factor: 5.157

Review 6.  Dephosphorylating eukaryotic RNA polymerase II.

Authors:  Joshua E Mayfield; Nathaniel T Burkholder; Yan Jessie Zhang
Journal:  Biochim Biophys Acta       Date:  2016-01-15

7.  Regulation of Androgen Receptor Activity by Transient Interactions of Its Transactivation Domain with General Transcription Regulators.

Authors:  Eva De Mol; Elzbieta Szulc; Claudio Di Sanza; Paula Martínez-Cristóbal; Carlos W Bertoncini; R Bryn Fenwick; Marta Frigolé-Vivas; Marianela Masín; Irene Hunter; Víctor Buzón; Isabelle Brun-Heath; Jesús García; Gianni De Fabritiis; Eva Estébanez-Perpiñá; Iain J McEwan; Ángel R Nebreda; Xavier Salvatella
Journal:  Structure       Date:  2017-12-07       Impact factor: 5.006

8.  Genetic and structural analysis of the essential fission yeast RNA polymerase II CTD phosphatase Fcp1.

Authors:  Beate Schwer; Agnidipta Ghosh; Ana M Sanchez; Christopher D Lima; Stewart Shuman
Journal:  RNA       Date:  2015-04-16       Impact factor: 4.942

Review 9.  Structure and mechanism of the RNA polymerase II transcription machinery.

Authors:  Allison C Schier; Dylan J Taatjes
Journal:  Genes Dev       Date:  2020-04-01       Impact factor: 11.361

Review 10.  Cyclin-Dependent Kinases (CDK) and Their Role in Diseases Development-Review.

Authors:  Paweł Łukasik; Michał Załuski; Izabela Gutowska
Journal:  Int J Mol Sci       Date:  2021-03-13       Impact factor: 5.923

  10 in total

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