Literature DB >> 12555850

The frontiers of time-resolved macromolecular crystallography: movies and chirped X-ray pulses.

Keith Moffat1.   

Abstract

Three important frontiers of ultrafast time-resolved macromolecular crystallography are presented: extension of this technique to other biological systems; further developments in the elucidation of mechanism through the analysis of time-dependent movies to extract the underlying, time-independent, intermediate structures; and enhanced time resolution. The last is intimately linked with the nature of the pump-probe experiment itself, with the sources of random and, particularly, systematic experimental error, and with the factors that contribute to overall time resolution. All experiments to date have utilized the unchirped X-ray pulses that are emitted by synchrotron sources. Chirped pulses offer certain advantages for ultrafast X-ray experiments such as those based on Laue diffraction. An energy-chirped pulse maps photon energy into time; a Laue diffraction experiment maps photon energy into detector space. Hence, a Laue experiment with an energy-chirped pulse maps time into space. The proposed sub-picosecond photon source could provide an excellent source of intense, chirped hard X-rays for such experiments.

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Year:  2003        PMID: 12555850     DOI: 10.1039/b201620f

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  10 in total

1.  Application of singular value decomposition to the analysis of time-resolved macromolecular x-ray data.

Authors:  Marius Schmidt; Sudarshan Rajagopal; Zhong Ren; Keith Moffat
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

Review 2.  Protein dynamics investigated by neutron scattering.

Authors:  Jörg Pieper; Gernot Renger
Journal:  Photosynth Res       Date:  2009-09-11       Impact factor: 3.573

Review 3.  Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics.

Authors:  Tatiana Maximova; Ryan Moffatt; Buyong Ma; Ruth Nussinov; Amarda Shehu
Journal:  PLoS Comput Biol       Date:  2016-04-28       Impact factor: 4.475

Review 4.  Toward structure determination using membrane-protein nanocrystals and microcrystals.

Authors:  Mark S Hunter; Petra Fromme
Journal:  Methods       Date:  2011-12-22       Impact factor: 3.608

Review 5.  Kinetic mechanisms for O2 binding to myoglobins and hemoglobins.

Authors:  John S Olson
Journal:  Mol Aspects Med       Date:  2021-09-17

6.  Time-resolved structural studies of protein reaction dynamics: a smorgasbord of X-ray approaches.

Authors:  Sebastian Westenhoff; Elena Nazarenko; Erik Malmerberg; Jan Davidsson; Gergely Katona; Richard Neutze
Journal:  Acta Crystallogr A       Date:  2010-02-18       Impact factor: 2.290

7.  Direct Observation of Insulin Association Dynamics with Time-Resolved X-ray Scattering.

Authors:  Dolev Rimmerman; Denis Leshchev; Darren J Hsu; Jiyun Hong; Irina Kosheleva; Lin X Chen
Journal:  J Phys Chem Lett       Date:  2017-09-05       Impact factor: 6.475

8.  Time-resolved protein nanocrystallography using an X-ray free-electron laser.

Authors:  Andrew Aquila; Mark S Hunter; R Bruce Doak; Richard A Kirian; Petra Fromme; Thomas A White; Jakob Andreasson; David Arnlund; Saša Bajt; Thomas R M Barends; Miriam Barthelmess; Michael J Bogan; Christoph Bostedt; Hervé Bottin; John D Bozek; Carl Caleman; Nicola Coppola; Jan Davidsson; Daniel P DePonte; Veit Elser; Sascha W Epp; Benjamin Erk; Holger Fleckenstein; Lutz Foucar; Matthias Frank; Raimund Fromme; Heinz Graafsma; Ingo Grotjohann; Lars Gumprecht; Janos Hajdu; Christina Y Hampton; Andreas Hartmann; Robert Hartmann; Stefan Hau-Riege; Günter Hauser; Helmut Hirsemann; Peter Holl; James M Holton; André Hömke; Linda Johansson; Nils Kimmel; Stephan Kassemeyer; Faton Krasniqi; Kai-Uwe Kühnel; Mengning Liang; Lukas Lomb; Erik Malmerberg; Stefano Marchesini; Andrew V Martin; Filipe R N C Maia; Marc Messerschmidt; Karol Nass; Christian Reich; Richard Neutze; Daniel Rolles; Benedikt Rudek; Artem Rudenko; Ilme Schlichting; Carlo Schmidt; Kevin E Schmidt; Joachim Schulz; M Marvin Seibert; Robert L Shoeman; Raymond Sierra; Heike Soltau; Dmitri Starodub; Francesco Stellato; Stephan Stern; Lothar Strüder; Nicusor Timneanu; Joachim Ullrich; Xiaoyu Wang; Garth J Williams; Georg Weidenspointner; Uwe Weierstall; Cornelia Wunderer; Anton Barty; John C H Spence; Henry N Chapman
Journal:  Opt Express       Date:  2012-01-30       Impact factor: 3.894

9.  New methods in time-resolved Laue pump-probe crystallography at synchrotron sources.

Authors:  Philip Coppens; Bertrand Fournier
Journal:  J Synchrotron Radiat       Date:  2015-01-28       Impact factor: 2.616

10.  Beating Darwin-Bragg losses in lab-based ultrafast x-ray experiments.

Authors:  Wilfred K Fullagar; Jens Uhlig; Ujjwal Mandal; Dharmalingam Kurunthu; Amal El Nahhas; Hideyuki Tatsuno; Alireza Honarfar; Fredrik Parnefjord Gustafsson; Villy Sundström; Mikko R J Palosaari; Kimmo M Kinnunen; Ilari J Maasilta; Luis Miaja-Avila; Galen C O'Neil; Young Il Joe; Daniel S Swetz; Joel N Ullom
Journal:  Struct Dyn       Date:  2017-03-24       Impact factor: 2.920

  10 in total

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