Literature DB >> 19763874

Protein dynamics investigated by neutron scattering.

Jörg Pieper1, Gernot Renger.   

Abstract

This contribution describes incoherent quasielastic neutron scattering (QENS) as a suitable tool for investigations of protein dynamics with special emphasis on applications in photosynthesis research. QENS characterizes protein dynamics via the measurement of energy and momentum exchange between sample system and incident low-energy neutrons (1 meV<E<20 meV). This method is especially sensitive for picosecond motions of hydrogen atoms because it makes use of the exceptionally large incoherent neutron scattering cross section of protons and their almost homogeneous distribution in proteins. After a short introduction into the basic principles of neutron scattering, a more detailed description of QENS will be presented including a short overview on instrumentation and theory. Recent QENS results will be discussed for the antenna complex LHC II and PS II membrane fragments. It is shown that diffusive protein dynamics is indispensable for enabling Q(A)(-·) reoxidation by Q(B) at temperatures above 240 K, which explains the strong dependence of this electron transfer step on temperature and hydration level of the sample. Finally, a new laser-QENS pump-probe technique will be introduced which permits in situ monitoring of protein dynamics correlated with a change of the functional state of the sample, i.e. a direct observation of structure-dynamics-function relationships in real time. © Springer Science+Business Media B.V. 2009

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Year:  2009        PMID: 19763874     DOI: 10.1007/s11120-009-9480-9

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  32 in total

1.  Flash-induced FTIR difference spectra of the water oxidizing complex in moderately hydrated photosystem II core films: effect of hydration extent on S-state transitions.

Authors:  Takumi Noguchi; Miwa Sugiura
Journal:  Biochemistry       Date:  2002-02-19       Impact factor: 3.162

Review 2.  Molecular dynamics simulations of the protein unfolding/folding reaction.

Authors:  Valerie Daggett
Journal:  Acc Chem Res       Date:  2002-06       Impact factor: 22.384

Review 3.  The frontiers of time-resolved macromolecular crystallography: movies and chirped X-ray pulses.

Authors:  Keith Moffat
Journal:  Faraday Discuss       Date:  2003       Impact factor: 4.008

4.  Effect of dehydration on light-induced reactions in photosystem II: photoreactions of cytochrome b559.

Authors:  Olga Kaminskaya; Gernot Renger; Vladimir A Shuvalov
Journal:  Biochemistry       Date:  2003-07-15       Impact factor: 3.162

Review 5.  Coupling of electron and proton transfer in oxidative water cleavage in photosynthesis.

Authors:  G Renger
Journal:  Biochim Biophys Acta       Date:  2004-04-12

Review 6.  An NMR perspective on enzyme dynamics.

Authors:  David D Boehr; H Jane Dyson; Peter E Wright
Journal:  Chem Rev       Date:  2006-08       Impact factor: 60.622

7.  Excitation wavelength-dependent electron-phonon and electron-vibrational coupling in the CP29 antenna complex of green plants.

Authors:  Margus Rätsep; Jörg Pieper; Klaus-Dieter Irrgang; Arvi Freiberg
Journal:  J Phys Chem B       Date:  2007-12-08       Impact factor: 2.991

8.  Temperature- and hydration-dependent protein dynamics in photosystem II of green plants studied by quasielastic neutron scattering.

Authors:  Jörg Pieper; Thomas Hauss; Alexandra Buchsteiner; Krzysztof Baczyński; Karolina Adamiak; Ruep E Lechner; Gernot Renger
Journal:  Biochemistry       Date:  2007-09-15       Impact factor: 3.162

9.  Internal molecular motions of bacteriorhodopsin: hydration-induced flexibility studied by quasielastic incoherent neutron scattering using oriented purple membranes.

Authors:  J Fitter; R E Lechner; G Buldt; N A Dencher
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

Review 10.  Protein-water displacement distributions.

Authors:  Wolfgang Doster; Marcus Settles
Journal:  Biochim Biophys Acta       Date:  2005-04-09
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  9 in total

1.  Dynamic properties of photosystem II membranes at physiological temperatures characterized by elastic incoherent neutron scattering. Increased flexibility associated with the inactivation of the oxygen evolving complex.

Authors:  Gergely Nagy; Jörg Pieper; Sashka B Krumova; László Kovács; Marcus Trapp; Győző Garab; Judith Peters
Journal:  Photosynth Res       Date:  2011-11-04       Impact factor: 3.573

2.  SANS investigation of the photosynthetic machinery of Chloroflexus aurantiacus.

Authors:  Kuo-Hsiang Tang; Volker S Urban; Jianzhong Wen; Yueyong Xin; Robert E Blankenship
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

3.  Perspectives in biological physics: the nDDB project for a neutron Dynamics Data Bank for biological macromolecules.

Authors:  Leonid Rusevich; Victoria García Sakai; Bruno Franzetti; Mark Johnson; Francesca Natali; Eric Pellegrini; Judith Peters; Jörg Pieper; Martin Weik; Giuseppe Zaccai
Journal:  Eur Phys J E Soft Matter       Date:  2013-07-17       Impact factor: 1.890

4.  Comparison of tryptophan fluorescence lifetimes in cyanobacterial photosystem I frozen in the light and in the dark.

Authors:  Peter P Knox; Boris N Korvatovskiy; Vladimir V Gorokhov; Sergey N Goryachev; Mahir D Mamedov; Vladimir Z Paschenko
Journal:  Photosynth Res       Date:  2018-10-23       Impact factor: 3.573

5.  Gernot Renger (1937-2013): his life, Max-Volmer Laboratory, and photosynthesis research.

Authors:  Ulrich Siggel; Franz-Josef Schmitt; Johannes Messinger
Journal:  Photosynth Res       Date:  2016-06-16       Impact factor: 3.573

6.  Solution structure of monomeric and trimeric photosystem I of Thermosynechococcus elongatus investigated by small-angle X-ray scattering.

Authors:  Maksym Golub; Mahdi Hejazi; Adrian Kölsch; Heiko Lokstein; D C Florian Wieland; Athina Zouni; Jörg Pieper
Journal:  Photosynth Res       Date:  2017-03-03       Impact factor: 3.573

Review 7.  Structure/function/dynamics of photosystem II plastoquinone binding sites.

Authors:  Maya D Lambreva; Daniela Russo; Fabio Polticelli; Viviana Scognamiglio; Amina Antonacci; Veranika Zobnina; Gaetano Campi; Giuseppina Rea
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

8.  Rate-limiting steps in the dark-to-light transition of Photosystem II - revealed by chlorophyll-a fluorescence induction.

Authors:  Melinda Magyar; Gábor Sipka; László Kovács; Bettina Ughy; Qingjun Zhu; Guangye Han; Vladimír Špunda; Petar H Lambrev; Jian-Ren Shen; Győző Garab
Journal:  Sci Rep       Date:  2018-02-09       Impact factor: 4.379

9.  Weak temperature dependence of P (+) H A (-) recombination in mutant Rhodobacter sphaeroides reaction centers.

Authors:  Krzysztof Gibasiewicz; Rafał Białek; Maria Pajzderska; Jerzy Karolczak; Gotard Burdziński; Michael R Jones; Klaus Brettel
Journal:  Photosynth Res       Date:  2016-03-04       Impact factor: 3.573

  9 in total

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