Literature DB >> 12537469

DNA polymerase-mediated DNA synthesis on a TNA template.

John C Chaput1, Justin K Ichida, Jack W Szostak.   

Abstract

TNA, or threose nucleic acid, is capable of Watson-Crick base pairing with DNA, RNA, and TNA; coupled with its chemical simplicity, this suggests that TNA is a possible progenitor of RNA. As an initial step toward developing the molecular tools necessary to investigate the functional capabilities of TNA by in vitro selection, we have screened a variety of DNA polymerases for activity on a TNA template. We report that despite having a repeating unit that is one atom shorter than that of DNA, several polymerases showed surprisingly good ability to copy limited stretches of TNA.

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Year:  2003        PMID: 12537469     DOI: 10.1021/ja028589k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

1.  Darwinian evolution of an alternative genetic system provides support for TNA as an RNA progenitor.

Authors:  Hanyang Yu; Su Zhang; John C Chaput
Journal:  Nat Chem       Date:  2012-01-10       Impact factor: 24.427

2.  Glyoxylate as a backbone linkage for a prebiotic ancestor of RNA.

Authors:  Heather D Bean; Frank A L Anet; Ian R Gould; Nicholas V Hud
Journal:  Orig Life Evol Biosph       Date:  2006-02       Impact factor: 1.950

Review 3.  Chemistry of nucleic acids: impacts in multiple fields.

Authors:  Omid Khakshoor; Eric T Kool
Journal:  Chem Commun (Camb)       Date:  2011-04-11       Impact factor: 6.222

4.  Amplification of RNA by an RNA polymerase ribozyme.

Authors:  David P Horning; Gerald F Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-15       Impact factor: 11.205

5.  Fluorescence-Activated Droplet Sorting for Single-Cell Directed Evolution.

Authors:  Derek Vallejo; Ali Nikoomanzar; Brian M Paegel; John C Chaput
Journal:  ACS Synth Biol       Date:  2019-05-23       Impact factor: 5.110

6.  Activation of Innate Immune Responses by a CpG Oligonucleotide Sequence Composed Entirely of Threose Nucleic Acid.

Authors:  Margaret J Lange; Donald H Burke; John C Chaput
Journal:  Nucleic Acid Ther       Date:  2018-12-11       Impact factor: 5.486

7.  DNA interstrand cross-linking upon irradiation of aryl halide C-nucleotides.

Authors:  Dianjie Hou; Marc M Greenberg
Journal:  J Org Chem       Date:  2014-02-24       Impact factor: 4.354

8.  Recognition of threosyl nucleotides by DNA and RNA polymerases.

Authors:  Veerle Kempeneers; Karen Vastmans; Jef Rozenski; Piet Herdewijn
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

9.  Enzymatic synthesis of DNA on glycerol nucleic acid templates without stable duplex formation between product and template.

Authors:  Ching-Hsuan Tsai; Jingyang Chen; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-04       Impact factor: 11.205

Review 10.  Recent progress toward the templated synthesis and directed evolution of sequence-defined synthetic polymers.

Authors:  Yevgeny Brudno; David R Liu
Journal:  Chem Biol       Date:  2009-03-27
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