Literature DB >> 12535761

Automated segmentation of multispectral brain MR images.

Anders H Andersen1, Zhiming Zhang, Malcolm J Avison, Don M Gash.   

Abstract

This work presents a robust and comprehensive approach for the in vivo automated segmentation and quantitative tissue volume measurement of normal brain composition from multispectral magnetic resonance imaging (MRI) data. Statistical pattern recognition methods based on a finite mixture model are used to partition the intracranial volume into gray matter (GM), white matter (WM), and cerebrospinal fluid (CSF) spaces. A masking algorithm initially extracts the brain volume from surrounding extrameningeal tissue. Radio frequency (RF) field inhomogeneity effects in the images are then removed using a recursive method that adapts to the intrinsic local tissue contrast. Our technique supports heterogeneous data with multispectral MR images of different contrast and intensity weighting acquired at varying spatial resolution and orientation. The proposed image segmentation methods have been tested using multispectral T1-, proton density-, and T2-weighted MRI data from young and aged non-human primates as well as from human subjects.

Entities:  

Mesh:

Year:  2002        PMID: 12535761     DOI: 10.1016/s0165-0270(02)00273-x

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  11 in total

1.  Novel whole brain segmentation and volume estimation using quantitative MRI.

Authors:  J West; J B M Warntjes; P Lundberg
Journal:  Eur Radiol       Date:  2011-11-24       Impact factor: 5.315

2.  Reliability and validity of MRI-based automated volumetry software relative to auto-assisted manual measurement of subcortical structures in HIV-infected patients from a multisite study.

Authors:  Jeffrey Dewey; George Hana; Troy Russell; Jared Price; Daniel McCaffrey; Jaroslaw Harezlak; Ekta Sem; Joy C Anyanwu; Charles R Guttmann; Bradford Navia; Ronald Cohen; David F Tate
Journal:  Neuroimage       Date:  2010-03-22       Impact factor: 6.556

3.  A new bias field correction method combining N3 and FCM for improved segmentation of breast density on MRI.

Authors:  Muqing Lin; Siwa Chan; Jeon-Hor Chen; Daniel Chang; Ke Nie; Shih-Ting Chen; Cheng-Ju Lin; Tzu-Ching Shih; Orhan Nalcioglu; Min-Ying Su
Journal:  Med Phys       Date:  2011-01       Impact factor: 4.071

4.  Pharmacologic MRI (phMRI) as a tool to differentiate Parkinson's disease-related from age-related changes in basal ganglia function.

Authors:  Anders H Andersen; Peter A Hardy; Eric Forman; Greg A Gerhardt; Don M Gash; Richard C Grondin; Zhiming Zhang
Journal:  Neurobiol Aging       Date:  2014-10-16       Impact factor: 4.673

5.  A subspace-based coil combination method for phased-array magnetic resonance imaging.

Authors:  Derya Gol Gungor; Lee C Potter
Journal:  Magn Reson Med       Date:  2015-03-13       Impact factor: 4.668

6.  Automated segmentation of mouse brain images using extended MRF.

Authors:  Min Hyeok Bae; Rong Pan; Teresa Wu; Alexandra Badea
Journal:  Neuroimage       Date:  2009-02-21       Impact factor: 6.556

7.  Effects of gadolinium contrast agent administration on automatic brain tissue classification of patients with multiple sclerosis.

Authors:  J B M Warntjes; A Tisell; A-M Landtblom; P Lundberg
Journal:  AJNR Am J Neuroradiol       Date:  2014-04-03       Impact factor: 3.825

8.  Segmentation of brain magnetic resonance images for measurement of gray matter atrophy in multiple sclerosis patients.

Authors:  Kunio Nakamura; Elizabeth Fisher
Journal:  Neuroimage       Date:  2008-10-22       Impact factor: 6.556

Review 9.  SyMRI of the Brain: Rapid Quantification of Relaxation Rates and Proton Density, With Synthetic MRI, Automatic Brain Segmentation, and Myelin Measurement.

Authors:  Akifumi Hagiwara; Marcel Warntjes; Masaaki Hori; Christina Andica; Misaki Nakazawa; Kanako Kunishima Kumamaru; Osamu Abe; Shigeki Aoki
Journal:  Invest Radiol       Date:  2017-10       Impact factor: 6.016

10.  Application of quantitative MRI for brain tissue segmentation at 1.5 T and 3.0 T field strengths.

Authors:  Janne West; Ida Blystad; Maria Engström; Jan B M Warntjes; Peter Lundberg
Journal:  PLoS One       Date:  2013-09-16       Impact factor: 3.240

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