Literature DB >> 9136639

Protein hydration dynamics in aqueous solution.

V P Denisov1, B Halle.   

Abstract

Water oxygen-17 and deuteron spin relaxation rates, measured as a function of resonance frequency, have been used to study the dynamics of protein hydration in aqueous solutions of ribonuclease A, lysozyme, myoglobin, trypsin and serum albumin. The relaxation data conform to the picture of protein hydration dynamics, proposed on the basis of previous studies of smaller proteins, where the long-lived water molecules responsible for the relaxation dispersion are identified with a small number of integrat water molecules seen in the crystal structures. These integral water molecules, with residence times in the range 10(-9)-10(-3) s, are either buried in internal cavities, trapped in narrow clefts or coordinated to metal ions. For the water molecules in the traditional hydration layer at the protein surface, the relaxation data suggest an average residence time in the range 10-50 ps, consistent with high-resolution 1H spectroscopy and computer simulations. The relaxation data also reveal some more specific features of protein hydration, relating to hydration of cavities that appear empty by crystallography, entrapment of water between structural domains of large proteins and subnanosecond 180 degrees flips in buried water clusters.

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Year:  1996        PMID: 9136639     DOI: 10.1039/fd9960300227

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  61 in total

1.  Orientational order and dynamics of hydration water in a single crystal of bovine pancreatic trypsin inhibitor.

Authors:  K Venu; L A Svensson; B Halle
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

2.  The dynamics of protein hydration water: a quantitative comparison of molecular dynamics simulations and neutron-scattering experiments.

Authors:  M Tarek; D J Tobias
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

3.  Residence times of water molecules in the hydration sites of myoglobin.

Authors:  V A Makarov; B K Andrews; P E Smith; B M Pettitt
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

4.  Femtosecond dynamics of intracellular water probed with nonlinear optical Kerr effect microspectroscopy.

Authors:  E O Potma; W P de Boeij; D A Wiersma
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

5.  Properties of water molecules in the active site gorge of acetylcholinesterase from computer simulation.

Authors:  Richard H Henchman; Kaihsu Tai; Tongye Shen; J Andrew McCammon
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

6.  Modeling the hydration of proteins: prediction of structural and hydrodynamic parameters from X-ray diffraction and scattering data.

Authors:  Helmut Durchschlag; Peter Zipper
Journal:  Eur Biophys J       Date:  2003-04-25       Impact factor: 1.733

7.  Biomolecular hydration: from water dynamics to hydrodynamics.

Authors:  Bertil Halle; Monika Davidovic
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-03       Impact factor: 11.205

8.  Protein reorientation and bound water molecules measured by 1H magnetic spin-lattice relaxation.

Authors:  Alexandra Van-Quynh; Steven Willson; Robert G Bryant
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

Review 9.  Protein hydration dynamics in solution: a critical survey.

Authors:  Bertil Halle
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

10.  Water and backbone dynamics in a hydrated protein.

Authors:  Galina Diakova; Yanina A Goddard; Jean-Pierre Korb; Robert G Bryant
Journal:  Biophys J       Date:  2010-01-06       Impact factor: 4.033

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