Literature DB >> 12514126

The structure of ActVA-Orf6, a novel type of monooxygenase involved in actinorhodin biosynthesis.

Giuliano Sciara1, Steven G Kendrew, Adriana E Miele, Neil G Marsh, Luca Federici, Francesco Malatesta, Giuliana Schimperna, Carmelinda Savino, Beatrice Vallone.   

Abstract

ActVA-Orf6 monooxygenase from Streptomyces coelicolor that catalyses the oxidation of an aromatic intermediate of the actinorhodin biosynthetic pathway is a member of a class of small monooxygenases that carry out oxygenation without the assistance of any of the prosthetic groups, metal ions or cofactors normally associated with activation of molecular oxygen. The overall structure is a ferredoxin-like fold with a novel dimeric assembly, indicating that the widely represented ferredoxin fold may sustain yet another functionality. The resolution (1.3 A) of the enzyme structure and its complex with substrate and product analogues allows us to visualize the mechanism of binding and activation of the substrate for attack by molecular oxygen, and utilization of two gates for the reaction components including a proton gate and an O(2)/H(2)O gate with a putative protein channel. This is the first crystal structure of an enzyme involved in the tailoring of a type II aromatic polyketide and illustrates some of the enzyme-substrate recognition features that may apply to a range of other enzymes involved in modifying a polyketide core structure.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12514126      PMCID: PMC140106          DOI: 10.1093/emboj/cdg031

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  49 in total

1.  Crystal structure of the macrocycle-forming thioesterase domain of the erythromycin polyketide synthase: versatility from a unique substrate channel.

Authors:  S C Tsai; L J Miercke; J Krucinski; R Gokhale; J C Chen; P G Foster; D E Cane; C Khosla; R M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

2.  Identification of a monooxygenase from Streptomyces coelicolor A3(2) involved in biosynthesis of actinorhodin: purification and characterization of the recombinant enzyme.

Authors:  S G Kendrew; D A Hopwood; E N Marsh
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

3.  Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design.

Authors:  J Liang; H Edelsbrunner; C Woodward
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

4.  The reverse turn as a polypeptide conformation in globular proteins.

Authors:  J L Crawford; W N Lipscomb; C G Schellman
Journal:  Proc Natl Acad Sci U S A       Date:  1973-02       Impact factor: 11.205

5.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

Review 6.  Protein-radical enzymes.

Authors:  J Z Pedersen; A Finazzi-Agrò
Journal:  FEBS Lett       Date:  1993-06-28       Impact factor: 4.124

Review 7.  Polyketide synthase gene manipulation: a structure-function approach in engineering novel antibiotics.

Authors:  C R Hutchinson; I Fujii
Journal:  Annu Rev Microbiol       Date:  1995       Impact factor: 15.500

8.  Accumulation of the angucycline antibiotic rabelomycin after disruption of an oxygenase gene in the jadomycin B biosynthetic gene cluster of Streptomyces venezuelae.

Authors:  Keqian Yang; Lei Han; Stephen W Ayer; Leo C Vining
Journal:  Microbiology (Reading)       Date:  1996-01       Impact factor: 2.777

9.  Hydroxyl radical damage to DNA sugar and model membranes induced by anthralin (dithranol).

Authors:  K Müller; D Gürster
Journal:  Biochem Pharmacol       Date:  1993-11-17       Impact factor: 5.858

10.  The Escherichia coli malonyl-CoA:acyl carrier protein transacylase at 1.5-A resolution. Crystal structure of a fatty acid synthase component.

Authors:  L Serre; E C Verbree; Z Dauter; A R Stuitje; Z S Derewenda
Journal:  J Biol Chem       Date:  1995-06-02       Impact factor: 5.157

View more
  58 in total

1.  Solution structure of a homodimeric hypothetical protein, At5g22580, a structural genomics target from Arabidopsis thaliana.

Authors:  Gabriel Cornilescu; Claudia C Cornilescu; Qin Zhao; Ronnie O Frederick; Francis C Peterson; Sandy Thao; John L Markley
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

2.  Structure of the hypothetical protein At3g17210 from Arabidopsis thaliana.

Authors:  Betsy L Lytle; Francis C Peterson; Kelly L Kjer; Ronnie O Frederick; Qin Zhao; Sandy Thao; Craig Bingman; Kenneth A Johnson; George N Phillips; Brian F Volkman
Journal:  J Biomol NMR       Date:  2004-04       Impact factor: 2.835

3.  Trimming down a protein structure to its bare foldons: spatial organization of the cooperative unit.

Authors:  Ellinor Haglund; Jens Danielsson; Saraboji Kadhirvel; Magnus O Lindberg; Derek T Logan; Mikael Oliveberg
Journal:  J Biol Chem       Date:  2011-11-22       Impact factor: 5.157

4.  Structure of the signal transduction protein TRAP (target of RNAIII-activating protein).

Authors:  Kim Henrick; Miriam Hirshberg
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-06-22

5.  Solution structure of the Escherichia coli protein ydhR: a putative mono-oxygenase.

Authors:  Matthew Revington; Anthony Semesi; Adelinda Yee; Gary S Shaw
Journal:  Protein Sci       Date:  2005-10-31       Impact factor: 6.725

Review 6.  Metagenomics and the protein universe.

Authors:  Adam Godzik
Journal:  Curr Opin Struct Biol       Date:  2011-04-14       Impact factor: 6.809

7.  The crystal structure of Rv0793, a hypothetical monooxygenase from M. tuberculosis.

Authors:  M Joanne Lemieux; Claire Ference; Maia M Cherney; Metian Wang; Craig Garen; Michael N G James
Journal:  J Struct Funct Genomics       Date:  2006-02-22

8.  Pseudomonas aeruginosa PumA acts on an endogenous phenazine to promote self-resistance.

Authors:  Abigail J Sporer; Christopher Beierschmitt; Anastasia Bendebury; Katherine E Zink; Alexa Price-Whelan; Marisa C Buzzeo; Laura M Sanchez; Lars E P Dietrich
Journal:  Microbiology (Reading)       Date:  2018-04-09       Impact factor: 2.777

9.  How a cofactor-free protein environment lowers the barrier to O2 reactivity.

Authors:  Melodie M Machovina; Emerald S Ellis; Thomas J Carney; Fikile R Brushett; Jennifer L DuBois
Journal:  J Biol Chem       Date:  2019-01-02       Impact factor: 5.157

10.  Structural basis for cofactor-independent dioxygenation of N-heteroaromatic compounds at the alpha/beta-hydrolase fold.

Authors:  Roberto A Steiner; Helge J Janssen; Pietro Roversi; Aaron J Oakley; Susanne Fetzner
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-22       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.